Species | Chip | Original Probe Count | Custom CDF Name | Statistics of Current Version |
Statistics of Previous Version |
% of Common Probes in Version |
% of Common Probesets in Version |
% of Identical Probesets in Version |
R Packages | CDF Seq Map Desc | ||||||
Probe % | Probeset # | Probe % | Probeset # | Current | Previous | Current | Previous | Current | Previous | Source | Win32 | |||||
Bos_taurus | Bovine | 265627 | Bovine_Bt_UG | 59.9 | 12413 | 60.4 | 12413 | 96.74 | 96.01 | 94.10 | 94.10 | 81.79 | 81.79 | C P A | C P A | O |
Canis_familiaris | Canine2 | 473162 | Canine2_Cf_UG | 33.9 | 10975 | 38.8 | 12999 | 98.06 | 85.71 | 97.76 | 82.54 | 93.05 | 78.56 | C P A | C P A | O |
Canis_familiaris | Canine2PM | 486081 | Canine2PM_Cf_UG | 33.0 | 10975 | C P A | C P A | O | ||||||||
Danio_rerio | Zebrafish | 249752 | Zebrafish_Dr_UG | 58.8 | 9383 | 54.1 | 8660 | 85.56 | 92.93 | 85.25 | 92.37 | 62.59 | 67.82 | C P A | C P A | O |
Drosophila_melanogaster | DrosGenome1 | 195994 | DrosGenome1_Dm_UG | 92.1 | 11829 | 92.2 | 11844 | 99.78 | 99.67 | 99.10 | 98.97 | 96.91 | 96.79 | C P A | C P A | O |
Drosophila_melanogaster | Drosophila2 | 265400 | Drosophila2_Dm_UG | 73.5 | 13004 | 73.5 | 13007 | 99.72 | 99.72 | 98.94 | 98.92 | 96.59 | 96.57 | C P A | C P A | O |
Gallus_gallus | Chicken | 424097 | Chicken_Gg_UG | 51.9 | 16288 | 52.3 | 16330 | 99.71 | 98.96 | 99.63 | 99.37 | 90.66 | 90.43 | C P A | C P A | O |
Homo_sapiens | HCG110 | 30313 | HCG110_Hs_UG | 70.0 | 1254 | 71.9 | 1261 | 99.00 | 96.37 | 95.61 | 95.08 | 72.25 | 71.85 | C P A | C P A | O |
Homo_sapiens | HGFocus | 98149 | HGFocus_Hs_UG | 74.2 | 7498 | 76.2 | 7545 | 98.29 | 95.70 | 94.43 | 93.84 | 75.62 | 75.15 | C P A | C P A | O |
Homo_sapiens | HGU133A | 247965 | HGU133A_Hs_UG | 67.0 | 11873 | 68.8 | 11941 | 98.23 | 95.60 | 93.82 | 93.28 | 71.13 | 70.72 | C P A | C P A | O |
Homo_sapiens | HGU133A2 | 247899 | HGU133A2_Hs_UG | 67.0 | 11872 | 68.9 | 11940 | 98.23 | 95.60 | 93.83 | 93.29 | 71.13 | 70.73 | C P A | C P A | O |
Homo_sapiens | HGU133B | 249502 | HGU133B_Hs_UG | 53.9 | 10924 | 54.8 | 10982 | 97.30 | 95.74 | 92.84 | 92.35 | 76.68 | 76.27 | C P A | C P A | O |
Homo_sapiens | HGU133Plus2 | 604258 | HGU133Plus2_Hs_UG | 57.0 | 21945 | 58.4 | 22184 | 97.74 | 95.47 | 93.89 | 92.88 | 71.73 | 70.96 | C P A | C P A | O |
Homo_sapiens | HGU219 | 548517 | HGU219_Hs_UG | 76.6 | 18206 | 77.7 | 18193 | 98.59 | 97.14 | 94.05 | 94.11 | 74.60 | 74.66 | C P A | C P A | O |
Homo_sapiens | HGU95A | 201807 | HGU95A_Hs_UG | 69.5 | 8223 | 71.2 | 8248 | 98.18 | 95.95 | 93.55 | 93.27 | 72.95 | 72.73 | C P A | C P A | O |
Homo_sapiens | HGU95Av2 | 201800 | HGU95Av2_Hs_UG | 69.6 | 8224 | 71.2 | 8248 | 98.18 | 95.96 | 93.56 | 93.28 | 72.90 | 72.68 | C P A | C P A | O |
Homo_sapiens | HGU95B | 201862 | HGU95B_Hs_UG | 59.5 | 7156 | 60.3 | 7186 | 97.58 | 96.24 | 93.35 | 92.96 | 76.96 | 76.64 | C P A | C P A | O |
Homo_sapiens | HGU95C | 201867 | HGU95C_Hs_UG | 49.1 | 6176 | 50.0 | 6214 | 97.56 | 95.89 | 93.43 | 92.85 | 77.48 | 77.00 | C P A | C P A | O |
Homo_sapiens | HGU95D | 201858 | HGU95D_Hs_UG | 38.3 | 5168 | 39.1 | 5214 | 97.99 | 95.84 | 94.74 | 93.90 | 80.40 | 79.69 | C P A | C P A | O |
Homo_sapiens | HGU95E | 201863 | HGU95E_Hs_UG | 44.2 | 5459 | 45.2 | 5510 | 97.44 | 95.33 | 92.64 | 91.78 | 76.13 | 75.43 | C P A | C P A | O |
Homo_sapiens | HTHGU133A | 247899 | HTHGU133A_Hs_UG | 67.0 | 11872 | 68.9 | 11940 | 98.23 | 95.60 | 93.83 | 93.29 | 71.13 | 70.73 | C P A | C P A | O |
Homo_sapiens | HTHGU133B | 249803 | HTHGU133B_Hs_UG | 53.9 | 10923 | 54.7 | 10980 | 97.30 | 95.75 | 92.85 | 92.37 | 76.68 | 76.28 | C P A | C P A | O |
Homo_sapiens | HTHGU133PlusPM | 528052 | HTHGU133PlusPM_Hs_UG | 57.3 | 21773 | 58.7 | 22016 | 97.80 | 95.54 | 93.90 | 92.86 | 73.34 | 72.53 | C P A | C P A | O |
Homo_sapiens | Hu6800 | 131541 | Hu6800_Hs_UG | 69.1 | 5052 | 71.2 | 5082 | 98.50 | 95.62 | 94.79 | 94.23 | 67.06 | 66.67 | C P A | C P A | O |
Homo_sapiens | HuEx10stv2 | 5431924 | HuEx10stv2_Hs_UG | 27.7 | 52314 | 28.1 | 52844 | 98.02 | 96.93 | 94.07 | 93.13 | 80.59 | 79.79 | C P A | C P A | O |
Homo_sapiens | HuGene10stv1 | 788904 | HuGene10stv1_Hs_UG | 67.0 | 18472 | 67.5 | 18486 | 98.37 | 97.65 | 93.60 | 93.53 | 73.93 | 73.88 | C P A | C P A | O |
Homo_sapiens | HuGene11stv1 | 803478 | HuGene11stv1_Hs_UG | 65.7 | 18470 | 66.1 | 18481 | 98.37 | 97.66 | 93.60 | 93.54 | 73.94 | 73.90 | C P A | C P A | O |
Homo_sapiens | Mapping10KXba142 | 213380 | Mapping10KXba142_Hs_UG | 0.7 | 257 | 1.2 | 331 | 95.86 | 55.40 | 90.27 | 70.09 | 48.25 | 37.46 | C P A | C P A | O |
Homo_sapiens | Mapping250KNsp | 3236396 | Mapping250KNsp_Hs_UG | 0.8 | 4997 | 1.3 | 6500 | 97.26 | 58.01 | 91.37 | 70.25 | 51.57 | 39.65 | C P A | C P A | O |
Homo_sapiens | Mapping250KSty | 3236180 | Mapping250KSty_Hs_UG | 1.0 | 5741 | 1.6 | 7254 | 96.85 | 58.16 | 91.19 | 72.17 | 48.46 | 38.35 | C P A | C P A | O |
Homo_sapiens | Mapping50KHind240 | 1144880 | Mapping50KHind240_Hs_UG | 1.0 | 1929 | 1.6 | 2340 | 96.93 | 61.07 | 93.52 | 77.09 | 56.25 | 46.37 | C P A | C P A | O |
Homo_sapiens | Mapping50KXba240 | 1179200 | Mapping50KXba240_Hs_UG | 0.8 | 1669 | 1.3 | 2034 | 96.97 | 59.72 | 92.75 | 76.11 | 54.16 | 44.44 | C P A | C P A | O |
Homo_sapiens | NuGOHs1a520180 | 265687 | NuGOHs1a520180_Hs_UG | 68.4 | 16781 | 69.8 | 16857 | 98.05 | 96.04 | 93.63 | 93.21 | 78.10 | 77.75 | C P A | C P A | O |
Homo_sapiens | U133X3P | 673904 | U133X3P_Hs_UG | 54.7 | 21636 | 56.1 | 21878 | 97.71 | 95.30 | 94.00 | 92.96 | 72.79 | 71.99 | C P A | C P A | O |
Homo_sapiens | gnGNF1Ba | 250925 | gnGNF1Ba_Hs_UG | 29.2 | 5380 | 29.7 | 5429 | 98.42 | 96.56 | 93.33 | 92.48 | 79.33 | 78.61 | C P A | C P A | O |
Macaca_mulatta | Rhesus | 668485 | Rhesus_MAmu_UG | 10.5 | 3872 | 17.8 | 6004 | 67.90 | 40.18 | 55.55 | 35.83 | 40.39 | 26.05 | C P | C P | O |
Mus_musculus | HTMG430A | 250325 | HTMG430A_Mm_UG | 71.4 | 12324 | 72.8 | 12320 | 98.79 | 96.94 | 95.11 | 95.14 | 78.67 | 78.69 | C P A | C P A | O |
Mus_musculus | HTMG430B | 249071 | HTMG430B_Mm_UG | 48.1 | 9379 | 48.4 | 9311 | 96.72 | 96.13 | 91.54 | 92.21 | 81.01 | 81.60 | C P A | C P A | O |
Mus_musculus | HTMG430PM | 505190 | HTMG430PM_Mm_UG | 59.0 | 19242 | 59.8 | 19114 | 97.94 | 96.62 | 93.62 | 94.25 | 77.86 | 78.38 | C P A | C P A | O |
Mus_musculus | MGU74Av2 | 197993 | MGU74Av2_Mm_UG | 61.8 | 7821 | 63.0 | 7832 | 98.85 | 96.96 | 95.59 | 95.45 | 78.14 | 78.03 | C P A | C P A | O |
Mus_musculus | MGU74Bv2 | 197131 | MGU74Bv2_Mm_UG | 61.9 | 7124 | 62.8 | 7119 | 98.29 | 96.98 | 93.68 | 93.75 | 79.59 | 79.65 | C P A | C P A | O |
Mus_musculus | MGU74Cv2 | 182797 | MGU74Cv2_Mm_UG | 35.7 | 4703 | 36.2 | 4726 | 97.51 | 96.15 | 93.32 | 92.87 | 83.01 | 82.61 | C P A | C P A | O |
Mus_musculus | MOE430A | 249958 | MOE430A_Mm_UG | 71.5 | 12324 | 72.9 | 12320 | 98.79 | 96.94 | 95.11 | 95.14 | 78.67 | 78.69 | C P A | C P A | O |
Mus_musculus | MOE430B | 248704 | MOE430B_Mm_UG | 48.2 | 9379 | 48.5 | 9311 | 96.72 | 96.13 | 91.54 | 92.21 | 81.01 | 81.60 | C P A | C P A | O |
Mus_musculus | MoEx10stv1 | 4779314 | MoEx10stv1_Mm_UG | 27.9 | 38488 | 28.0 | 38225 | 97.67 | 97.24 | 91.78 | 92.41 | 77.11 | 77.65 | C P A | C P A | O |
Mus_musculus | MoGene10stv1 | 819132 | MoGene10stv1_Mm_UG | 69.8 | 19536 | 69.6 | 19284 | 97.08 | 97.34 | 92.80 | 94.02 | 73.39 | 74.35 | C P A | C P A | O |
Mus_musculus | MoGene11stv1 | 828268 | MoGene11stv1_Mm_UG | 68.8 | 19535 | 68.6 | 19281 | 97.08 | 97.35 | 92.80 | 94.03 | 73.39 | 74.36 | C P A | C P A | O |
Mus_musculus | Mouse4302 | 496468 | Mouse4302_Mm_UG | 60.0 | 19242 | 60.8 | 19114 | 97.94 | 96.62 | 93.62 | 94.25 | 77.86 | 78.38 | C P A | C P A | O |
Mus_musculus | Mouse430A2 | 249958 | Mouse430A2_Mm_UG | 71.5 | 12324 | 72.9 | 12320 | 98.79 | 96.94 | 95.11 | 95.14 | 78.67 | 78.69 | C P A | C P A | O |
Mus_musculus | Mu11KsubA | 131280 | Mu11KsubA_Mm_UG | 61.9 | 4390 | 63.5 | 4410 | 98.62 | 96.21 | 95.76 | 95.33 | 73.62 | 73.29 | C P A | C P A | O |
Mus_musculus | Mu11KsubB | 119580 | Mu11KsubB_Mm_UG | 48.6 | 2823 | 49.7 | 2828 | 98.68 | 96.65 | 95.25 | 95.08 | 74.81 | 74.68 | C P A | C P A | O |
Mus_musculus | NuGOMm1a520177 | 262909 | NuGOMm1a520177_Mm_UG | 65.3 | 16454 | 66.0 | 16426 | 97.60 | 96.60 | 94.00 | 94.16 | 82.58 | 82.72 | C P A | C P A | O |
Mus_musculus | gnGNF1Musa | 362266 | gnGNF1Musa_Mm_UG | 53.7 | 17565 | 54.0 | 17465 | 97.42 | 96.71 | 93.66 | 94.19 | 82.29 | 82.77 | C P A | C P A | O |
Rattus_norvegicus | HTRat230PM | 351132 | HTRat230PM_Rn_UG | 62.7 | 18385 | 62.3 | 18375 | 94.49 | 95.10 | 92.60 | 92.65 | 75.75 | 75.79 | C P A | C P A | O |
Rattus_norvegicus | HTRatFocus | 266962 | HTRatFocus_Rn_UG | 69.0 | 15228 | 68.1 | 15111 | 94.12 | 95.40 | 91.98 | 92.69 | 74.67 | 75.25 | C P A | C P A | O |
Rattus_norvegicus | RAE230A | 175477 | RAE230A_Rn_UG | 69.3 | 10890 | 69.0 | 10799 | 95.25 | 95.67 | 92.54 | 93.32 | 76.67 | 77.31 | C P A | C P A | O |
Rattus_norvegicus | RAE230B | 168984 | RAE230B_Rn_UG | 58.9 | 8968 | 58.4 | 8894 | 93.69 | 94.56 | 90.90 | 91.66 | 75.97 | 76.60 | C P A | C P A | O |
Rattus_norvegicus | RGU34A | 140317 | RGU34A_Rn_UG | 64.6 | 4746 | 64.9 | 4760 | 96.86 | 96.37 | 94.25 | 93.97 | 74.63 | 74.41 | C P A | C P A | O |
Rattus_norvegicus | RGU34B | 140312 | RGU34B_Rn_UG | 56.6 | 5237 | 56.2 | 5172 | 93.82 | 94.52 | 90.53 | 91.67 | 72.81 | 73.72 | C P A | C P A | O |
Rattus_norvegicus | RGU34C | 140284 | RGU34C_Rn_UG | 56.2 | 5272 | 55.9 | 5191 | 93.90 | 94.49 | 90.90 | 92.31 | 71.21 | 72.32 | C P A | C P A | O |
Rattus_norvegicus | RNU34 | 21305 | RNU34_Rn_UG | 74.4 | 727 | 75.4 | 735 | 99.00 | 97.73 | 97.39 | 96.33 | 84.73 | 83.81 | C P A | C P A | O |
Rattus_norvegicus | RTU34 | 20464 | RTU34_Rn_UG | 61.5 | 543 | 62.3 | 545 | 96.18 | 95.06 | 94.66 | 94.31 | 66.67 | 66.42 | C P A | C P A | O |
Rattus_norvegicus | RaEx10stv1 | 4108266 | RaEx10stv1_Rn_UG | 23.7 | 30436 | 21.4 | 31833 | 86.61 | 96.08 | 88.29 | 84.42 | 70.04 | 66.96 | C P A | C P A | O |
Rattus_norvegicus | RaGene10stv1 | 777760 | RaGene10stv1_Rn_UG | 62.5 | 17838 | 57.3 | 17938 | 88.65 | 96.82 | 86.93 | 86.45 | 65.79 | 65.43 | C P A | C P A | O |
Rattus_norvegicus | RaGene11stv1 | 788189 | RaGene11stv1_Rn_UG | 61.6 | 17837 | 56.4 | 17936 | 88.63 | 96.83 | 86.93 | 86.45 | 65.80 | 65.43 | C P A | C P A | O |
Rattus_norvegicus | Rat2302 | 342410 | Rat2302_Rn_UG | 64.3 | 18385 | 63.9 | 18375 | 94.49 | 95.10 | 92.60 | 92.65 | 75.75 | 75.79 | C P A | C P A | O |
Rattus_norvegicus | RatToxFX | 24535 | RatToxFX_Rn_UG | 67.2 | 1632 | 67.9 | 1632 | 97.26 | 96.26 | 94.91 | 94.91 | 81.68 | 81.68 | C P A | C P A | O |
Sus_scrofa | Porcine | 265635 | Porcine_Ss_UG | 30.5 | 7644 | 33.7 | 8214 | 85.71 | 77.53 | 71.32 | 66.37 | 56.75 | 52.81 | C P A | C P A | O |