Species | Chip | Original Probe Count | Custom CDF Name | Statistics of Current Version |
Statistics of Previous Version |
% of Common Probes in Version |
% of Common Probesets in Version |
% of Identical Probesets in Version |
R Packages | CDF Seq Map Desc | ||||||
Probe % | Probeset # | Probe % | Probeset # | Current | Previous | Current | Previous | Current | Previous | Source | Win32 | |||||
Bos_taurus | Bovine | 265627 | Bovine_Bt_ENSG | 39.3 | 9001 | 35.6 | 8247 | 83.32 | 91.89 | 85.05 | 92.82 | 67.98 | 74.20 | C P | C P | O |
Caenorhabditis_elegans | Celegans | 249165 | Celegans_Ce_ENSG | 79.4 | 17333 | 79.4 | 17333 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Canis_familiaris | Canine2 | 473162 | Canine2_Cf_ENSG | 45.3 | 16162 | 45.3 | 16162 | 99.99 | 100.00 | 100.00 | 100.00 | 99.90 | 99.90 | C P | C P | O |
Canis_familiaris | Canine2PM | 486081 | Canine2PM_Cf_ENSG | 44.1 | 16162 | 44.1 | 16162 | 99.99 | 100.00 | 100.00 | 100.00 | 99.90 | 99.90 | C P | C P | O |
Canis_familiaris | cangene11st | 621953 | cangene11st_Cf_ENSG | 77.3 | 21489 | C P | C P | O | ||||||||
Danio_rerio | Zebrafish | 249752 | Zebrafish_Dr_ENSG | 56.0 | 8666 | 54.9 | 8602 | 97.60 | 99.58 | 98.86 | 99.59 | 85.41 | 86.05 | C P | C P | O |
Danio_rerio | zebgene10st | 1245559 | zebgene10st_Dr_ENSG | 46.0 | 24567 | C P | C P | O | ||||||||
Danio_rerio | zebgene11st | 1245558 | zebgene11st_Dr_ENSG | 46.0 | 24567 | C P | C P | O | ||||||||
Drosophila_melanogaster | DrosGenome1 | 195994 | DrosGenome1_Dm_ENSG | 89.2 | 11428 | 89.5 | 11518 | 99.52 | 99.27 | 97.46 | 96.70 | 96.83 | 96.08 | C P | C P | O |
Drosophila_melanogaster | Drosophila2 | 265400 | Drosophila2_Dm_ENSG | 69.1 | 12405 | 69.0 | 12462 | 98.47 | 98.56 | 96.77 | 96.32 | 94.56 | 94.13 | C P | C P | O |
Equus_caballus | equgene10st | 537520 | equgene10st_EQca_ENSG | 83.3 | 22407 | C P | C P | O | ||||||||
Gallus_gallus | Chicken | 424097 | Chicken_Gg_ENSG | 37.5 | 11824 | 37.3 | 11818 | 99.64 | 100.00 | 99.95 | 100.00 | 96.17 | 96.22 | C P | C P | O |
Gallus_gallus | chigene10st | 464100 | chigene10st_Gg_ENSG | 82.8 | 15490 | C P | C P | O | ||||||||
Gallus_gallus | chigene11st | 464100 | chigene11st_Gg_ENSG | 82.8 | 15490 | C P | C P | O | ||||||||
Homo_sapiens | HCG110 | 30313 | HCG110_Hs_ENSG | 70.4 | 1252 | 69.8 | 1254 | 97.23 | 98.04 | 98.16 | 98.01 | 87.86 | 87.72 | C P | C P | O |
Homo_sapiens | HGFocus | 98149 | HGFocus_Hs_ENSG | 76.5 | 7582 | 76.0 | 7584 | 96.97 | 97.64 | 97.59 | 97.56 | 90.50 | 90.48 | C P | C P | O |
Homo_sapiens | HGU133A | 247965 | HGU133A_Hs_ENSG | 69.4 | 11827 | 68.8 | 11801 | 96.47 | 97.42 | 97.24 | 97.46 | 87.56 | 87.76 | C P | C P | O |
Homo_sapiens | HGU133A2 | 247899 | HGU133A2_Hs_ENSG | 69.5 | 11826 | 68.8 | 11800 | 96.47 | 97.42 | 97.24 | 97.46 | 87.57 | 87.76 | C P | C P | O |
Homo_sapiens | HGU133B | 249502 | HGU133B_Hs_ENSG | 45.5 | 8185 | 44.1 | 8012 | 93.30 | 96.25 | 94.03 | 96.06 | 84.91 | 86.74 | C P | C P | O |
Homo_sapiens | HGU133Plus2 | 604258 | HGU133Plus2_Hs_ENSG | 55.3 | 19019 | 54.1 | 18919 | 94.56 | 96.76 | 95.94 | 96.45 | 83.18 | 83.62 | C P | C P | O |
Homo_sapiens | HGU219 | 548517 | HGU219_Hs_ENSG | 76.5 | 17716 | 75.6 | 17617 | 96.20 | 97.31 | 96.99 | 97.53 | 87.55 | 88.05 | C P | C P | O |
Homo_sapiens | HGU95A | 201807 | HGU95A_Hs_ENSG | 71.2 | 8123 | 70.7 | 8116 | 96.96 | 97.71 | 97.55 | 97.63 | 90.73 | 90.81 | C P | C P | O |
Homo_sapiens | HGU95Av2 | 201800 | HGU95Av2_Hs_ENSG | 71.3 | 8123 | 70.7 | 8117 | 96.96 | 97.71 | 97.55 | 97.62 | 90.72 | 90.78 | C P | C P | O |
Homo_sapiens | HGU95B | 201862 | HGU95B_Hs_ENSG | 52.0 | 5730 | 50.8 | 5633 | 94.54 | 96.79 | 95.03 | 96.66 | 88.64 | 90.17 | C P | C P | O |
Homo_sapiens | HGU95C | 201867 | HGU95C_Hs_ENSG | 38.0 | 4431 | 36.6 | 4305 | 92.59 | 96.11 | 93.25 | 95.98 | 86.01 | 88.52 | C P | C P | O |
Homo_sapiens | HGU95D | 201858 | HGU95D_Hs_ENSG | 24.1 | 3163 | 22.5 | 3015 | 90.41 | 96.49 | 91.34 | 95.82 | 82.71 | 86.77 | C P | C P | O |
Homo_sapiens | HGU95E | 201863 | HGU95E_Hs_ENSG | 37.5 | 4362 | 36.1 | 4259 | 92.88 | 96.55 | 93.65 | 95.91 | 85.30 | 87.37 | C P | C P | O |
Homo_sapiens | HTHGU133A | 247899 | HTHGU133A_Hs_ENSG | 69.5 | 11826 | 68.8 | 11800 | 96.47 | 97.42 | 97.24 | 97.46 | 87.57 | 87.76 | C P | C P | O |
Homo_sapiens | HTHGU133B | 249803 | HTHGU133B_Hs_ENSG | 45.4 | 8184 | 44.0 | 8011 | 93.31 | 96.25 | 94.02 | 96.06 | 84.92 | 86.76 | C P | C P | O |
Homo_sapiens | HTHGU133PlusPM | 528052 | HTHGU133PlusPM_Hs_ENSG | 55.9 | 18919 | 54.7 | 18807 | 94.78 | 96.83 | 95.91 | 96.48 | 84.22 | 84.72 | C P | C P | O |
Homo_sapiens | Hu6800 | 131541 | Hu6800_Hs_ENSG | 70.2 | 5013 | 69.6 | 5003 | 96.80 | 97.72 | 97.61 | 97.80 | 85.54 | 85.71 | C P | C P | O |
Homo_sapiens | HuEx10stv2 | 5431924 | HuEx10stv2_Hs_ENSG | 28.4 | 36354 | 27.4 | 35317 | 93.99 | 97.37 | 93.36 | 96.10 | 79.43 | 81.76 | C P | C P | O |
Homo_sapiens | HuGene10stv1 | 788904 | HuGene10stv1_Hs_ENSG | 78.4 | 22741 | 78.2 | 22732 | 97.16 | 97.35 | 97.18 | 97.22 | 88.74 | 88.78 | C P | C P | O |
Homo_sapiens | HuGene11stv1 | 803478 | HuGene11stv1_Hs_ENSG | 76.8 | 22711 | 76.7 | 22704 | 97.16 | 97.36 | 97.18 | 97.21 | 88.76 | 88.79 | C P | C P | O |
Homo_sapiens | Mapping10KXba142 | 213380 | Mapping10KXba142_Hs_ENSG | 0.9 | 199 | 0.5 | 190 | 49.73 | 93.53 | 89.45 | 93.68 | 15.08 | 15.79 | C P | C P | O |
Homo_sapiens | Mapping250KNsp | 3236396 | Mapping250KNsp_Hs_ENSG | 1.3 | 4574 | 0.6 | 3612 | 43.75 | 95.59 | 75.34 | 95.40 | 5.62 | 7.12 | C P | C P | O |
Homo_sapiens | Mapping250KSty | 3236180 | Mapping250KSty_Hs_ENSG | 1.7 | 5413 | 0.8 | 4424 | 44.19 | 95.58 | 77.78 | 95.16 | 7.30 | 8.93 | C P | C P | O |
Homo_sapiens | Mapping50KHind240 | 1144880 | Mapping50KHind240_Hs_ENSG | 1.5 | 1428 | 0.7 | 1338 | 47.41 | 95.44 | 89.43 | 95.44 | 8.05 | 8.59 | C P | C P | O |
Homo_sapiens | Mapping50KXba240 | 1179200 | Mapping50KXba240_Hs_ENSG | 1.2 | 1193 | 0.6 | 1097 | 47.37 | 96.83 | 88.68 | 96.44 | 7.54 | 8.20 | C P | C P | O |
Homo_sapiens | NuGOHs1a520180 | 265687 | NuGOHs1a520180_Hs_ENSG | 72.0 | 17259 | 71.1 | 17184 | 95.80 | 97.08 | 96.52 | 96.94 | 90.89 | 91.29 | C P | C P | O |
Homo_sapiens | U133X3P | 673904 | U133X3P_Hs_ENSG | 54.1 | 18908 | 52.8 | 18797 | 94.34 | 96.71 | 95.82 | 96.39 | 84.55 | 85.05 | C P | C P | O |
Homo_sapiens | gnGNF1Ba | 250925 | gnGNF1Ba_Hs_ENSG | 30.6 | 5715 | 30.0 | 5634 | 95.84 | 97.79 | 95.75 | 97.12 | 89.76 | 91.05 | C P | C P | O |
Macaca_mulatta | Rhesus | 668485 | Rhesus_MAmu_ENSG | 34.9 | 13484 | 34.9 | 13484 | 99.99 | 100.00 | 100.00 | 100.00 | 99.91 | 99.91 | C P | C P | O |
Mus_musculus | HTMG430A | 250325 | HTMG430A_Mm_ENSG | 72.6 | 12142 | 72.5 | 12155 | 99.56 | 99.71 | 99.82 | 99.71 | 98.10 | 97.99 | C P | C P | O |
Mus_musculus | HTMG430B | 249071 | HTMG430B_Mm_ENSG | 41.5 | 7490 | 41.4 | 7464 | 99.30 | 99.71 | 99.35 | 99.69 | 98.42 | 98.77 | C P | C P | O |
Mus_musculus | HTMG430PM | 505190 | HTMG430PM_Mm_ENSG | 56.3 | 17149 | 56.2 | 17144 | 99.47 | 99.70 | 99.71 | 99.74 | 97.99 | 98.02 | C P | C P | O |
Mus_musculus | MGU74A | 201964 | MGU74A_Mm_ENSG | 54.5 | 7075 | C P | C P | O | ||||||||
Mus_musculus | MGU74Av2 | 197993 | MGU74Av2_Mm_ENSG | 62.6 | 7815 | 62.5 | 7825 | 99.55 | 99.67 | 99.80 | 99.67 | 97.38 | 97.25 | C P | C P | O |
Mus_musculus | MGU74Bv2 | 197131 | MGU74Bv2_Mm_ENSG | 59.3 | 6471 | 59.2 | 6472 | 99.53 | 99.71 | 99.66 | 99.64 | 98.01 | 97.99 | C P | C P | O |
Mus_musculus | MGU74Cv2 | 182797 | MGU74Cv2_Mm_ENSG | 28.0 | 3669 | 28.0 | 3670 | 99.22 | 99.47 | 99.45 | 99.43 | 98.12 | 98.09 | C P | C P | O |
Mus_musculus | MOE430A | 249958 | MOE430A_Mm_ENSG | 72.7 | 12142 | 72.6 | 12155 | 99.56 | 99.71 | 99.82 | 99.71 | 98.10 | 97.99 | C P | C P | O |
Mus_musculus | MOE430B | 248704 | MOE430B_Mm_ENSG | 41.6 | 7490 | 41.4 | 7464 | 99.30 | 99.71 | 99.35 | 99.69 | 98.42 | 98.77 | C P | C P | O |
Mus_musculus | MoEx10stv1 | 4779314 | MoEx10stv1_Mm_ENSG | 26.3 | 26165 | 26.2 | 26003 | 99.34 | 99.76 | 99.13 | 99.75 | 96.69 | 97.29 | C P | C P | O |
Mus_musculus | MoGene10stv1 | 819132 | MoGene10stv1_Mm_ENSG | 76.6 | 22309 | 76.6 | 22308 | 99.71 | 99.68 | 99.65 | 99.65 | 98.77 | 98.78 | C P | C P | O |
Mus_musculus | MoGene11stv1 | 828268 | MoGene11stv1_Mm_ENSG | 75.5 | 22305 | 75.6 | 22304 | 99.71 | 99.68 | 99.65 | 99.65 | 98.77 | 98.78 | C P | C P | O |
Mus_musculus | Mouse4302 | 496468 | Mouse4302_Mm_ENSG | 57.3 | 17149 | 57.2 | 17144 | 99.47 | 99.70 | 99.71 | 99.74 | 97.99 | 98.02 | C P | C P | O |
Mus_musculus | Mouse430A2 | 249958 | Mouse430A2_Mm_ENSG | 72.7 | 12142 | 72.6 | 12155 | 99.56 | 99.71 | 99.82 | 99.71 | 98.10 | 97.99 | C P | C P | O |
Mus_musculus | Mu11KsubA | 131280 | Mu11KsubA_Mm_ENSG | 62.9 | 4335 | 62.6 | 4334 | 99.39 | 99.76 | 99.77 | 99.79 | 95.52 | 95.55 | C P | C P | O |
Mus_musculus | Mu11KsubB | 119580 | Mu11KsubB_Mm_ENSG | 47.3 | 2844 | 47.1 | 2842 | 99.22 | 99.63 | 99.58 | 99.65 | 94.87 | 94.93 | C P | C P | O |
Mus_musculus | NuGOMm1a520177 | 262909 | NuGOMm1a520177_Mm_ENSG | 66.8 | 16683 | 66.7 | 16679 | 99.59 | 99.71 | 99.69 | 99.71 | 98.90 | 98.92 | C P | C P | O |
Mus_musculus | gnGNF1Musa | 362266 | gnGNF1Musa_Mm_ENSG | 53.9 | 17200 | 53.7 | 17186 | 99.30 | 99.68 | 99.62 | 99.70 | 97.75 | 97.83 | C P | C P | O |
Rattus_norvegicus | HTRat230PM | 351132 | HTRat230PM_Rn_ENSG | 37.0 | 11194 | 36.8 | 11187 | 99.36 | 100.00 | 99.94 | 100.00 | 93.55 | 93.61 | C P | C P | O |
Rattus_norvegicus | HTRatFocus | 266962 | HTRatFocus_Rn_ENSG | 47.1 | 10962 | 46.8 | 10955 | 99.36 | 100.00 | 99.94 | 100.00 | 93.68 | 93.74 | C P | C P | O |
Rattus_norvegicus | RAE230A | 175477 | RAE230A_Rn_ENSG | 50.1 | 8297 | 49.8 | 8292 | 99.38 | 100.00 | 99.94 | 100.00 | 94.19 | 94.25 | C P | C P | O |
Rattus_norvegicus | RAE230B | 168984 | RAE230B_Rn_ENSG | 25.2 | 3872 | 25.0 | 3870 | 99.33 | 100.00 | 99.95 | 100.00 | 93.62 | 93.67 | C P | C P | O |
Rattus_norvegicus | RGU34A | 140317 | RGU34A_Rn_ENSG | 52.5 | 4107 | 52.1 | 4104 | 99.26 | 100.00 | 99.93 | 100.00 | 91.60 | 91.67 | C P | C P | O |
Rattus_norvegicus | RGU34B | 140312 | RGU34B_Rn_ENSG | 30.7 | 2897 | 30.5 | 2896 | 99.25 | 100.00 | 99.97 | 100.00 | 93.27 | 93.30 | C P | C P | O |
Rattus_norvegicus | RGU34C | 140284 | RGU34C_Rn_ENSG | 33.3 | 3237 | 33.1 | 3233 | 99.31 | 100.00 | 99.88 | 100.00 | 93.39 | 93.50 | C P | C P | O |
Rattus_norvegicus | RNU34 | 21305 | RNU34_Rn_ENSG | 64.9 | 697 | 64.4 | 696 | 99.36 | 100.00 | 99.86 | 100.00 | 91.82 | 91.95 | C P | C P | O |
Rattus_norvegicus | RTU34 | 20464 | RTU34_Rn_ENSG | 54.0 | 503 | 53.7 | 502 | 99.40 | 100.00 | 99.80 | 100.00 | 92.05 | 92.23 | C P | C P | O |
Rattus_norvegicus | RaEx10stv1 | 4108266 | RaEx10stv1_Rn_ENSG | 21.2 | 21795 | 21.2 | 21794 | 100.00 | 100.00 | 100.00 | 100.00 | 99.94 | 99.95 | C P | C P | O |
Rattus_norvegicus | RaGene10stv1 | 777760 | RaGene10stv1_Rn_ENSG | 73.4 | 23109 | 73.4 | 23109 | 99.99 | 100.00 | 100.00 | 100.00 | 99.96 | 99.96 | C P | C P | O |
Rattus_norvegicus | RaGene11stv1 | 788189 | RaGene11stv1_Rn_ENSG | 72.3 | 23105 | 72.3 | 23105 | 99.99 | 100.00 | 100.00 | 100.00 | 99.96 | 99.96 | C P | C P | O |
Rattus_norvegicus | Rat2302 | 342410 | Rat2302_Rn_ENSG | 37.9 | 11194 | 37.7 | 11187 | 99.36 | 100.00 | 99.94 | 100.00 | 93.55 | 93.61 | C P | C P | O |
Rattus_norvegicus | RatToxFX | 24535 | RatToxFX_Rn_ENSG | 49.5 | 1257 | 49.3 | 1257 | 99.41 | 100.00 | 100.00 | 100.00 | 94.83 | 94.83 | C P | C P | O |
Saccharomyces_cerevisiae | YGS98 | 138412 | YGS98_Sc_ENSG | 74.3 | 6131 | 74.4 | 6135 | 100.00 | 99.82 | 100.00 | 99.93 | 99.05 | 98.99 | C P | C P | O |
Saccharomyces_cerevisiae | Yeast2 | 120855 | Yeast2_Sc_ENSG | 51.0 | 5567 | 51.1 | 5571 | 100.00 | 99.80 | 100.00 | 99.93 | 99.39 | 99.32 | C P | C P | O |
Sus_scrofa | Porcine | 265635 | Porcine_Ss_ENSG | 18.0 | 4636 | 18.0 | 4636 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Sus_scrofa | SNOWBALLs520824F | 1093229 | SNOWBALLs520824F_Ss_ENSG | 26.0 | 14251 | C P | C P | O | ||||||||
Sus_scrofa | porgene10st | 595966 | porgene10st_Ss_ENSG | 58.2 | 15818 | C P | C P | O | ||||||||
Sus_scrofa | porgene11st | 595966 | porgene11st_Ss_ENSG | 58.2 | 15818 | C P | C P | O |