Species | Chip | Original Probe Count | Custom CDF Name | Statistics of Current Version |
Statistics of Previous Version |
% of Common Probes in Version |
% of Common Probesets in Version |
% of Identical Probesets in Version |
R Packages | CDF Seq Map Desc | ||||||
Probe % | Probeset # | Probe % | Probeset # | Current | Previous | Current | Previous | Current | Previous | Source | Win32 | |||||
Bos_taurus | Bovine | 265627 | Bovine_Bt_ENST | 42.7 | 10108 | 40.9 | 10771 | 88.44 | 92.30 | 87.26 | 81.89 | 71.79 | 67.38 | C P | C P | O |
Caenorhabditis_elegans | Celegans | 249165 | Celegans_Ce_ENST | 88.1 | 26373 | 88.1 | 26373 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Canis_familiaris | Canine2 | 473162 | Canine2_Cf_ENST | 52.6 | 21760 | 52.6 | 21760 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Canis_familiaris | Canine2PM | 486081 | Canine2PM_Cf_ENST | 51.2 | 21760 | 51.2 | 21760 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Canis_familiaris | cangene11st | 621953 | cangene11st_Cf_ENST | 73.8 | 25630 | C P | C P | O | ||||||||
Danio_rerio | Zebrafish | 249752 | Zebrafish_Dr_ENST | 59.9 | 14432 | 59.4 | 14128 | 98.88 | 99.70 | 96.37 | 98.44 | 95.90 | 97.96 | C P | C P | O |
Danio_rerio | zebgene10st | 1245559 | zebgene10st_Dr_ENST | 50.1 | 46136 | C P | C P | O | ||||||||
Danio_rerio | zebgene11st | 1245558 | zebgene11st_Dr_ENST | 50.1 | 46136 | C P | C P | O | ||||||||
Drosophila_melanogaster | DrosGenome1 | 195994 | DrosGenome1_Dm_ENST | 92.7 | 20846 | 92.8 | 19278 | 99.71 | 99.59 | 88.48 | 95.68 | 88.12 | 95.28 | C P | C P | O |
Drosophila_melanogaster | Drosophila2 | 265400 | Drosophila2_Dm_ENST | 74.8 | 22430 | 74.6 | 20808 | 98.69 | 98.95 | 88.16 | 95.03 | 86.90 | 93.68 | C P | C P | O |
Equus_caballus | equgene10st | 537520 | equgene10st_EQca_ENST | 83.3 | 24380 | C P | C P | O | ||||||||
Gallus_gallus | Chicken | 424097 | Chicken_Gg_ENST | 43.5 | 16547 | 43.5 | 16547 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Gallus_gallus | chigene10st | 464100 | chigene10st_Gg_ENST | 86.7 | 21654 | C P | C P | O | ||||||||
Gallus_gallus | chigene11st | 464100 | chigene11st_Gg_ENST | 86.7 | 21654 | C P | C P | O | ||||||||
Homo_sapiens | HCG110 | 30313 | HCG110_Hs_ENST | 78.6 | 6087 | 78.6 | 5656 | 99.43 | 99.40 | 83.44 | 89.80 | 80.63 | 86.78 | C P | C P | O |
Homo_sapiens | HGFocus | 98149 | HGFocus_Hs_ENST | 84.7 | 31919 | 84.5 | 30772 | 99.51 | 99.67 | 86.13 | 89.34 | 84.50 | 87.65 | C P | C P | O |
Homo_sapiens | HGU133A | 247965 | HGU133A_Hs_ENST | 76.5 | 54730 | 76.2 | 51891 | 98.92 | 99.33 | 85.58 | 90.26 | 82.60 | 87.12 | C P | C P | O |
Homo_sapiens | HGU133A2 | 247899 | HGU133A2_Hs_ENST | 76.6 | 54730 | 76.3 | 51891 | 98.92 | 99.33 | 85.58 | 90.26 | 82.60 | 87.12 | C P | C P | O |
Homo_sapiens | HGU133B | 249502 | HGU133B_Hs_ENST | 48.2 | 26635 | 47.6 | 26069 | 95.50 | 96.65 | 87.39 | 89.28 | 85.04 | 86.89 | C P | C P | O |
Homo_sapiens | HGU133Plus2 | 604258 | HGU133Plus2_Hs_ENST | 59.5 | 81476 | 59.0 | 77834 | 96.77 | 97.51 | 86.07 | 90.10 | 82.61 | 86.47 | C P | C P | O |
Homo_sapiens | HGU219 | 548517 | HGU219_Hs_ENST | 84.6 | 88501 | 84.0 | 82342 | 98.35 | 99.03 | 85.10 | 91.47 | 80.93 | 86.98 | C P | C P | O |
Homo_sapiens | HGU95A | 201807 | HGU95A_Hs_ENST | 77.9 | 35552 | 77.7 | 34437 | 99.03 | 99.33 | 86.19 | 88.98 | 83.72 | 86.43 | C P | C P | O |
Homo_sapiens | HGU95Av2 | 201800 | HGU95Av2_Hs_ENST | 77.9 | 35516 | 77.7 | 34403 | 99.03 | 99.33 | 86.18 | 88.97 | 83.72 | 86.43 | C P | C P | O |
Homo_sapiens | HGU95B | 201862 | HGU95B_Hs_ENST | 55.0 | 19040 | 54.3 | 18547 | 96.67 | 97.86 | 87.37 | 89.70 | 85.46 | 87.73 | C P | C P | O |
Homo_sapiens | HGU95C | 201867 | HGU95C_Hs_ENST | 40.6 | 14334 | 39.7 | 13955 | 94.50 | 96.74 | 85.98 | 88.32 | 84.10 | 86.38 | C P | C P | O |
Homo_sapiens | HGU95D | 201858 | HGU95D_Hs_ENST | 25.7 | 9830 | 24.5 | 9286 | 91.67 | 95.99 | 84.14 | 89.07 | 82.81 | 87.66 | C P | C P | O |
Homo_sapiens | HGU95E | 201863 | HGU95E_Hs_ENST | 40.0 | 15011 | 39.2 | 14558 | 94.89 | 96.78 | 86.56 | 89.25 | 84.48 | 87.11 | C P | C P | O |
Homo_sapiens | HTHGU133A | 247899 | HTHGU133A_Hs_ENST | 76.6 | 54730 | 76.3 | 51891 | 98.92 | 99.33 | 85.58 | 90.26 | 82.60 | 87.12 | C P | C P | O |
Homo_sapiens | HTHGU133B | 249803 | HTHGU133B_Hs_ENST | 48.1 | 26635 | 47.5 | 26069 | 95.50 | 96.65 | 87.39 | 89.28 | 85.04 | 86.89 | C P | C P | O |
Homo_sapiens | HTHGU133PlusPM | 528052 | HTHGU133PlusPM_Hs_ENST | 60.1 | 80134 | 59.6 | 76575 | 96.98 | 97.65 | 86.08 | 90.08 | 82.68 | 86.53 | C P | C P | O |
Homo_sapiens | Hu6800 | 131541 | Hu6800_Hs_ENST | 77.2 | 23861 | 77.1 | 22732 | 99.29 | 99.51 | 84.89 | 89.11 | 82.18 | 86.26 | C P | C P | O |
Homo_sapiens | HuEx10stv2 | 5431924 | HuEx10stv2_Hs_ENST | 29.4 | 157421 | 28.7 | 144964 | 95.59 | 97.95 | 84.95 | 92.24 | 79.05 | 85.84 | C P | C P | O |
Homo_sapiens | HuGene10stv1 | 788904 | HuGene10stv1_Hs_ENST | 73.0 | 126242 | 73.3 | 115707 | 98.97 | 98.60 | 84.94 | 92.68 | 79.29 | 86.51 | C P | C P | O |
Homo_sapiens | HuGene11stv1 | 803478 | HuGene11stv1_Hs_ENST | 71.6 | 126228 | 71.9 | 115694 | 98.96 | 98.61 | 84.94 | 92.68 | 79.30 | 86.52 | C P | C P | O |
Homo_sapiens | Mapping10KXba142 | 213380 | Mapping10KXba142_Hs_ENST | 0.5 | 435 | 0.5 | 416 | 92.43 | 95.05 | 83.45 | 87.26 | 83.45 | 87.26 | C P | C P | O |
Homo_sapiens | Mapping250KNsp | 3236396 | Mapping250KNsp_Hs_ENST | 0.6 | 9599 | 0.6 | 9112 | 92.17 | 96.71 | 85.08 | 89.63 | 84.39 | 88.90 | C P | C P | O |
Homo_sapiens | Mapping250KSty | 3236180 | Mapping250KSty_Hs_ENST | 0.9 | 12653 | 0.8 | 12007 | 90.64 | 95.94 | 84.60 | 89.15 | 83.81 | 88.32 | C P | C P | O |
Homo_sapiens | Mapping50KHind240 | 1144880 | Mapping50KHind240_Hs_ENST | 0.8 | 3436 | 0.8 | 3316 | 92.72 | 95.57 | 85.51 | 88.60 | 85.27 | 88.36 | C P | C P | O |
Homo_sapiens | Mapping50KXba240 | 1179200 | Mapping50KXba240_Hs_ENST | 0.6 | 2612 | 0.6 | 2489 | 92.49 | 96.95 | 84.84 | 89.03 | 84.46 | 88.63 | C P | C P | O |
Homo_sapiens | NuGOHs1a520180 | 265687 | NuGOHs1a520180_Hs_ENST | 78.4 | 60422 | 78.4 | 59371 | 98.34 | 98.30 | 87.15 | 88.69 | 85.32 | 86.83 | C P | C P | O |
Homo_sapiens | U133X3P | 673904 | U133X3P_Hs_ENST | 57.6 | 75446 | 57.1 | 72824 | 96.60 | 97.43 | 86.47 | 89.58 | 83.59 | 86.60 | C P | C P | O |
Homo_sapiens | gnGNF1Ba | 250925 | gnGNF1Ba_Hs_ENST | 34.4 | 21751 | 34.3 | 21130 | 98.42 | 98.63 | 87.53 | 90.10 | 85.20 | 87.70 | C P | C P | O |
Macaca_mulatta | Rhesus | 668485 | Rhesus_MAmu_ENST | 36.8 | 23864 | 36.8 | 23864 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Mus_musculus | HTMG430A | 250325 | HTMG430A_Mm_ENST | 78.0 | 33655 | 77.8 | 33273 | 99.77 | 99.97 | 97.87 | 99.00 | 97.61 | 98.73 | C P | C P | O |
Mus_musculus | HTMG430B | 249071 | HTMG430B_Mm_ENST | 42.1 | 15935 | 41.9 | 15855 | 99.36 | 99.88 | 98.26 | 98.76 | 98.11 | 98.61 | C P | C P | O |
Mus_musculus | HTMG430PM | 505190 | HTMG430PM_Mm_ENST | 59.2 | 45484 | 59.1 | 45043 | 99.63 | 99.94 | 97.99 | 98.95 | 97.72 | 98.67 | C P | C P | O |
Mus_musculus | MGU74A | 201964 | MGU74A_Mm_ENST | 58.8 | 18118 | C P | C P | O | ||||||||
Mus_musculus | MGU74Av2 | 197993 | MGU74Av2_Mm_ENST | 67.5 | 20106 | 67.4 | 19825 | 99.84 | 99.96 | 97.57 | 98.95 | 97.31 | 98.69 | C P | C P | O |
Mus_musculus | MGU74Bv2 | 197131 | MGU74Bv2_Mm_ENST | 61.9 | 15521 | 61.8 | 15480 | 99.69 | 99.87 | 98.65 | 98.91 | 98.52 | 98.78 | C P | C P | O |
Mus_musculus | MGU74Cv2 | 182797 | MGU74Cv2_Mm_ENST | 28.4 | 7588 | 28.3 | 7568 | 99.41 | 99.82 | 98.59 | 98.85 | 98.55 | 98.81 | C P | C P | O |
Mus_musculus | MOE430A | 249958 | MOE430A_Mm_ENST | 78.1 | 33655 | 77.9 | 33273 | 99.77 | 99.97 | 97.87 | 99.00 | 97.61 | 98.73 | C P | C P | O |
Mus_musculus | MOE430B | 248704 | MOE430B_Mm_ENST | 42.2 | 15935 | 42.0 | 15855 | 99.36 | 99.88 | 98.26 | 98.76 | 98.11 | 98.61 | C P | C P | O |
Mus_musculus | MoEx10stv1 | 4779314 | MoEx10stv1_Mm_ENST | 26.4 | 81690 | 26.3 | 80250 | 99.41 | 99.97 | 97.43 | 99.18 | 96.78 | 98.52 | C P | C P | O |
Mus_musculus | MoGene10stv1 | 819132 | MoGene10stv1_Mm_ENST | 75.7 | 73174 | 75.6 | 72107 | 99.81 | 99.98 | 97.66 | 99.11 | 97.25 | 98.69 | C P | C P | O |
Mus_musculus | MoGene11stv1 | 828268 | MoGene11stv1_Mm_ENST | 74.7 | 73170 | 74.5 | 72103 | 99.81 | 99.98 | 97.66 | 99.11 | 97.25 | 98.69 | C P | C P | O |
Mus_musculus | Mouse4302 | 496468 | Mouse4302_Mm_ENST | 60.3 | 45484 | 60.1 | 45043 | 99.63 | 99.94 | 97.99 | 98.95 | 97.72 | 98.67 | C P | C P | O |
Mus_musculus | Mouse430A2 | 249958 | Mouse430A2_Mm_ENST | 78.1 | 33655 | 77.9 | 33273 | 99.77 | 99.97 | 97.87 | 99.00 | 97.61 | 98.73 | C P | C P | O |
Mus_musculus | Mu11KsubA | 131280 | Mu11KsubA_Mm_ENST | 66.6 | 10913 | 66.6 | 10742 | 99.85 | 99.95 | 97.55 | 99.11 | 97.32 | 98.86 | C P | C P | O |
Mus_musculus | Mu11KsubB | 119580 | Mu11KsubB_Mm_ENST | 53.8 | 8586 | 53.7 | 8443 | 99.82 | 100.00 | 97.34 | 98.99 | 97.08 | 98.72 | C P | C P | O |
Mus_musculus | NuGOMm1a520177 | 262909 | NuGOMm1a520177_Mm_ENST | 70.8 | 36820 | 70.6 | 36596 | 99.71 | 99.94 | 98.28 | 98.88 | 98.13 | 98.73 | C P | C P | O |
Mus_musculus | gnGNF1Musa | 362266 | gnGNF1Musa_Mm_ENST | 55.5 | 38149 | 55.3 | 37862 | 99.55 | 99.93 | 98.14 | 98.88 | 98.00 | 98.74 | C P | C P | O |
Rattus_norvegicus | HTRat230PM | 351132 | HTRat230PM_Rn_ENST | 39.5 | 17001 | 39.5 | 17001 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Rattus_norvegicus | HTRatFocus | 266962 | HTRatFocus_Rn_ENST | 50.4 | 16689 | 50.4 | 16689 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Rattus_norvegicus | RAE230A | 175477 | RAE230A_Rn_ENST | 53.6 | 12693 | 53.6 | 12693 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Rattus_norvegicus | RAE230B | 168984 | RAE230B_Rn_ENST | 26.8 | 5752 | 26.8 | 5752 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Rattus_norvegicus | RGU34A | 140317 | RGU34A_Rn_ENST | 57.3 | 6574 | 57.3 | 6574 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Rattus_norvegicus | RGU34B | 140312 | RGU34B_Rn_ENST | 32.3 | 4247 | 32.3 | 4247 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Rattus_norvegicus | RGU34C | 140284 | RGU34C_Rn_ENST | 35.4 | 4722 | 35.4 | 4722 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Rattus_norvegicus | RNU34 | 21305 | RNU34_Rn_ENST | 70.3 | 1249 | 70.3 | 1249 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Rattus_norvegicus | RTU34 | 20464 | RTU34_Rn_ENST | 59.3 | 739 | 59.3 | 739 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Rattus_norvegicus | RaEx10stv1 | 4108266 | RaEx10stv1_Rn_ENST | 21.5 | 31785 | 21.5 | 31785 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Rattus_norvegicus | RaGene10stv1 | 777760 | RaGene10stv1_Rn_ENST | 71.6 | 32037 | 71.6 | 32037 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Rattus_norvegicus | RaGene11stv1 | 788189 | RaGene11stv1_Rn_ENST | 70.6 | 32034 | 70.6 | 32034 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Rattus_norvegicus | Rat2302 | 342410 | Rat2302_Rn_ENST | 40.6 | 17001 | 40.6 | 17001 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Rattus_norvegicus | RatToxFX | 24535 | RatToxFX_Rn_ENST | 53.2 | 1869 | 53.2 | 1869 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Saccharomyces_cerevisiae | YGS98 | 138412 | YGS98_Sc_ENST | 75.1 | 6167 | 75.3 | 6171 | 100.00 | 99.82 | 100.00 | 99.94 | 99.03 | 98.96 | C P | C P | O |
Saccharomyces_cerevisiae | Yeast2 | 120855 | Yeast2_Sc_ENST | 51.3 | 5605 | 51.4 | 5609 | 100.00 | 99.80 | 100.00 | 99.93 | 99.36 | 99.29 | C P | C P | O |
Sus_scrofa | Porcine | 265635 | Porcine_Ss_ENST | 21.1 | 5484 | 21.1 | 5484 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Sus_scrofa | SNOWBALLs520824F | 1093229 | SNOWBALLs520824F_Ss_ENST | 30.7 | 15924 | C P | C P | O | ||||||||
Sus_scrofa | porgene10st | 595966 | porgene10st_Ss_ENST | 59.0 | 16886 | C P | C P | O | ||||||||
Sus_scrofa | porgene11st | 595966 | porgene11st_Ss_ENST | 59.0 | 16886 | C P | C P | O |