Species | Chip | Original Probe Count | Custom CDF Name | Statistics of Current Version |
Statistics of Previous Version |
% of Common Probes in Version |
% of Common Probesets in Version |
% of Identical Probesets in Version |
R Packages | CDF Seq Map Desc | ||||||
Probe % | Probeset # | Probe % | Probeset # | Current | Previous | Current | Previous | Current | Previous | Source | Win32 | |||||
Bos_taurus | Bovine | 265627 | Bovine_Bt_ENSG | 39.3 | 9001 | 39.3 | 9001 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Bos_taurus | bovgene10st | 557951 | bovgene10st_Bt_ENSG | 72.4 | 18904 | C P | C P | O | ||||||||
Bos_taurus | bovgene11st | 557951 | bovgene11st_Bt_ENSG | 72.4 | 18904 | C P | C P | O | ||||||||
Caenorhabditis_elegans | Celegans | 249165 | Celegans_Ce_ENSG | 79.6 | 17488 | 79.4 | 17333 | 98.72 | 99.01 | 98.62 | 99.50 | 96.28 | 97.14 | C P | C P | O |
Canis_familiaris | Canine2 | 473162 | Canine2_Cf_ENSG | 49.0 | 15843 | 45.3 | 16162 | 80.78 | 87.25 | 86.66 | 84.95 | 52.19 | 51.16 | C P | C P | O |
Canis_familiaris | Canine2PM | 486081 | Canine2PM_Cf_ENSG | 47.7 | 15843 | 44.1 | 16162 | 80.78 | 87.25 | 86.66 | 84.95 | 52.19 | 51.16 | C P | C P | O |
Canis_familiaris | cangene10st | 657153 | cangene10st_Cf_ENSG | 65.3 | 19776 | C P | C P | O | ||||||||
Canis_familiaris | cangene11st | 621953 | cangene11st_Cf_ENSG | 69.0 | 19776 | 77.3 | 21489 | 95.72 | 85.42 | 88.20 | 81.17 | 50.38 | 46.37 | C P | C P | O |
Danio_rerio | Zebrafish | 249752 | Zebrafish_Dr_ENSG | 56.4 | 8693 | 56.0 | 8666 | 99.01 | 99.80 | 99.54 | 99.85 | 93.98 | 94.28 | C P | C P | O |
Danio_rerio | zebgene10st | 1245559 | zebgene10st_Dr_ENSG | 46.2 | 24580 | 46.0 | 24567 | 99.59 | 99.86 | 99.64 | 99.69 | 98.49 | 98.54 | C P | C P | O |
Danio_rerio | zebgene11st | 1245558 | zebgene11st_Dr_ENSG | 46.2 | 24580 | 46.0 | 24567 | 99.59 | 99.86 | 99.64 | 99.69 | 98.49 | 98.54 | C P | C P | O |
Drosophila_melanogaster | DrosGenome1 | 195994 | DrosGenome1_Dm_ENSG | 89.2 | 11428 | 89.2 | 11428 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Drosophila_melanogaster | Drosophila2 | 265400 | Drosophila2_Dm_ENSG | 69.1 | 12405 | 69.1 | 12405 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Equus_caballus | equgene10st | 537520 | equgene10st_EQca_ENSG | 83.3 | 22407 | 83.3 | 22407 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Equus_caballus | equgene11st | 543179 | equgene11st_EQca_ENSG | 82.5 | 22407 | C P | C P | O | ||||||||
Gallus_gallus | Chicken | 424097 | Chicken_Gg_ENSG | 37.5 | 11824 | 37.5 | 11824 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Gallus_gallus | chigene10st | 464100 | chigene10st_Gg_ENSG | 82.8 | 15490 | 82.8 | 15490 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Gallus_gallus | chigene11st | 464100 | chigene11st_Gg_ENSG | 82.8 | 15490 | 82.8 | 15490 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Homo_sapiens | HCG110 | 30313 | HCG110_Hs_ENSG | 70.3 | 1252 | 70.4 | 1252 | 99.25 | 99.20 | 99.44 | 99.44 | 97.60 | 97.60 | C P | C P | O |
Homo_sapiens | HGFocus | 98149 | HGFocus_Hs_ENSG | 76.6 | 7585 | 76.5 | 7582 | 99.10 | 99.20 | 99.20 | 99.24 | 98.18 | 98.22 | C P | C P | O |
Homo_sapiens | HGU133A | 247965 | HGU133A_Hs_ENSG | 69.7 | 11859 | 69.4 | 11827 | 98.71 | 99.05 | 98.91 | 99.18 | 97.09 | 97.35 | C P | C P | O |
Homo_sapiens | HGU133A2 | 247899 | HGU133A2_Hs_ENSG | 69.7 | 11859 | 69.5 | 11826 | 98.71 | 99.06 | 98.91 | 99.19 | 97.09 | 97.36 | C P | C P | O |
Homo_sapiens | HGU133B | 249502 | HGU133B_Hs_ENSG | 47.0 | 8484 | 45.5 | 8185 | 95.15 | 98.33 | 94.87 | 98.34 | 92.88 | 96.27 | C P | C P | O |
Homo_sapiens | HGU133Plus2 | 604258 | HGU133Plus2_Hs_ENSG | 56.6 | 19536 | 55.3 | 19019 | 96.27 | 98.60 | 95.98 | 98.59 | 93.00 | 95.53 | C P | C P | O |
Homo_sapiens | HGU219 | 548517 | HGU219_Hs_ENSG | 76.5 | 17737 | 76.5 | 17716 | 98.85 | 98.90 | 99.02 | 99.14 | 96.50 | 96.61 | C P | C P | O |
Homo_sapiens | HGU95A | 201807 | HGU95A_Hs_ENSG | 71.6 | 8154 | 71.2 | 8123 | 98.73 | 99.16 | 98.92 | 99.30 | 97.38 | 97.75 | C P | C P | O |
Homo_sapiens | HGU95Av2 | 201800 | HGU95Av2_Hs_ENSG | 71.6 | 8154 | 71.3 | 8123 | 98.73 | 99.16 | 98.92 | 99.30 | 97.39 | 97.76 | C P | C P | O |
Homo_sapiens | HGU95B | 201862 | HGU95B_Hs_ENSG | 53.3 | 5858 | 52.0 | 5730 | 96.22 | 98.57 | 96.33 | 98.48 | 94.69 | 96.81 | C P | C P | O |
Homo_sapiens | HGU95C | 201867 | HGU95C_Hs_ENSG | 39.1 | 4569 | 38.0 | 4431 | 95.67 | 98.46 | 95.62 | 98.60 | 93.87 | 96.80 | C P | C P | O |
Homo_sapiens | HGU95D | 201858 | HGU95D_Hs_ENSG | 25.3 | 3323 | 24.1 | 3163 | 93.82 | 98.48 | 93.50 | 98.23 | 91.87 | 96.52 | C P | C P | O |
Homo_sapiens | HGU95E | 201863 | HGU95E_Hs_ENSG | 38.6 | 4481 | 37.5 | 4362 | 95.52 | 98.25 | 95.60 | 98.21 | 93.46 | 96.01 | C P | C P | O |
Homo_sapiens | HTHGU133A | 247899 | HTHGU133A_Hs_ENSG | 69.7 | 11859 | 69.5 | 11826 | 98.71 | 99.06 | 98.91 | 99.19 | 97.09 | 97.36 | C P | C P | O |
Homo_sapiens | HTHGU133B | 249803 | HTHGU133B_Hs_ENSG | 47.0 | 8484 | 45.4 | 8184 | 95.15 | 98.34 | 94.87 | 98.35 | 92.88 | 96.29 | C P | C P | O |
Homo_sapiens | HTHGU133PlusPM | 528052 | HTHGU133PlusPM_Hs_ENSG | 57.1 | 19429 | 55.9 | 18919 | 96.49 | 98.64 | 96.02 | 98.60 | 93.15 | 95.66 | C P | C P | O |
Homo_sapiens | Hu6800 | 131541 | Hu6800_Hs_ENSG | 70.3 | 5011 | 70.2 | 5013 | 99.12 | 99.18 | 99.26 | 99.22 | 97.53 | 97.49 | C P | C P | O |
Homo_sapiens | HuEx10stv2 | 5431924 | HuEx10stv2_Hs_ENSG | 29.0 | 37217 | 28.4 | 36354 | 96.59 | 98.70 | 94.38 | 96.62 | 88.27 | 90.36 | C P | C P | O |
Homo_sapiens | Mapping10KXba142 | 213380 | Mapping10KXba142_Hs_ENSG | 1.0 | 205 | 0.9 | 199 | 94.50 | 98.51 | 96.59 | 99.50 | 93.66 | 96.48 | C P | C P | O |
Homo_sapiens | Mapping250KNsp | 3236396 | Mapping250KNsp_Hs_ENSG | 1.3 | 4724 | 1.3 | 4574 | 93.73 | 95.38 | 94.09 | 97.18 | 88.72 | 91.63 | C P | C P | O |
Homo_sapiens | Mapping250KSty | 3236180 | Mapping250KSty_Hs_ENSG | 1.7 | 5649 | 1.7 | 5413 | 92.59 | 95.70 | 93.38 | 97.45 | 87.24 | 91.04 | C P | C P | O |
Homo_sapiens | Mapping50KHind240 | 1144880 | Mapping50KHind240_Hs_ENSG | 1.5 | 1483 | 1.5 | 1428 | 94.06 | 95.72 | 94.88 | 98.53 | 88.13 | 91.53 | C P | C P | O |
Homo_sapiens | Mapping50KXba240 | 1179200 | Mapping50KXba240_Hs_ENSG | 1.2 | 1239 | 1.2 | 1193 | 94.35 | 96.19 | 95.16 | 98.83 | 89.99 | 93.46 | C P | C P | O |
Homo_sapiens | NuGOHs1a520180 | 265687 | NuGOHs1a520180_Hs_ENSG | 72.4 | 17332 | 72.0 | 17259 | 98.50 | 99.02 | 98.64 | 99.06 | 97.57 | 97.98 | C P | C P | O |
Homo_sapiens | PrimeView | 501271 | PrimeView_Hs_ENSG | 79.0 | 17718 | C P | C P | O | ||||||||
Homo_sapiens | U133AAofAv2 | 259234 | U133AAofAv2_Hs_ENSG | 66.9 | 11859 | C P | C P | O | ||||||||
Homo_sapiens | U133X3P | 673904 | U133X3P_Hs_ENSG | 55.5 | 19432 | 54.1 | 18908 | 96.18 | 98.61 | 95.94 | 98.60 | 93.20 | 95.78 | C P | C P | O |
Homo_sapiens | Xcel | 1324676 | Xcel_Hs_ENSG | 45.0 | 22152 | C P | C P | O | ||||||||
Homo_sapiens | gnGNF1Ba | 250925 | gnGNF1Ba_Hs_ENSG | 30.9 | 5758 | 30.6 | 5715 | 98.34 | 99.21 | 98.28 | 99.02 | 96.73 | 97.46 | C P | C P | O |
Homo_sapiens | hugene10st | 788904 | hugene10st_Hs_ENSG | 76.5 | 21996 | 78.4 | 22741 | 98.68 | 96.38 | 98.60 | 95.37 | 95.07 | 91.96 | C P | C P | O |
Homo_sapiens | hugene11st | 803478 | hugene11st_Hs_ENSG | 75.0 | 21971 | 76.8 | 22711 | 98.68 | 96.37 | 98.59 | 95.38 | 95.07 | 91.97 | C P | C P | O |
Homo_sapiens | hugene20st | 1022045 | hugene20st_Hs_ENSG | 64.1 | 32633 | C P | C P | O | ||||||||
Homo_sapiens | hugene21st | 1022045 | hugene21st_Hs_ENSG | 64.1 | 32633 | C P | C P | O | ||||||||
Macaca_mulatta | Rhesus | 668485 | Rhesus_MAmu_ENSG | 35.0 | 13485 | 34.9 | 13484 | 99.77 | 100.00 | 99.99 | 100.00 | 96.78 | 96.79 | C P | C P | O |
Macaca_mulatta | rhegene10st | 810924 | rhegene10st_MAmu_ENSG | 63.7 | 24175 | C P | C P | O | ||||||||
Macaca_mulatta | rhegene11st | 810924 | rhegene11st_MAmu_ENSG | 63.7 | 24175 | C P | C P | O | ||||||||
Mus_musculus | HTMG430A | 250325 | HTMG430A_Mm_ENSG | 72.4 | 12138 | 72.6 | 12142 | 99.12 | 98.86 | 98.99 | 98.96 | 97.72 | 97.69 | C P | C P | O |
Mus_musculus | HTMG430B | 249071 | HTMG430B_Mm_ENSG | 40.9 | 7341 | 41.5 | 7490 | 97.68 | 96.19 | 97.68 | 95.74 | 95.64 | 93.74 | C P | C P | O |
Mus_musculus | HTMG430PM | 505190 | HTMG430PM_Mm_ENSG | 55.9 | 16996 | 56.3 | 17149 | 98.60 | 97.88 | 98.61 | 97.73 | 96.41 | 95.54 | C P | C P | O |
Mus_musculus | MGU74A | 201964 | MGU74A_Mm_ENSG | 54.5 | 7081 | 54.5 | 7075 | 99.17 | 99.14 | 98.84 | 98.93 | 98.05 | 98.13 | C P | C P | O |
Mus_musculus | MGU74Av2 | 197993 | MGU74Av2_Mm_ENSG | 62.5 | 7822 | 62.6 | 7815 | 99.17 | 99.10 | 98.89 | 98.98 | 97.98 | 98.07 | C P | C P | O |
Mus_musculus | MGU74Bv2 | 197131 | MGU74Bv2_Mm_ENSG | 59.1 | 6438 | 59.3 | 6471 | 98.59 | 98.28 | 98.73 | 98.22 | 97.27 | 96.77 | C P | C P | O |
Mus_musculus | MGU74Cv2 | 182797 | MGU74Cv2_Mm_ENSG | 27.6 | 3607 | 28.0 | 3669 | 98.25 | 96.75 | 98.39 | 96.73 | 97.53 | 95.88 | C P | C P | O |
Mus_musculus | MOE430A | 249958 | MOE430A_Mm_ENSG | 72.5 | 12138 | 72.7 | 12142 | 99.12 | 98.86 | 98.99 | 98.96 | 97.72 | 97.69 | C P | C P | O |
Mus_musculus | MOE430B | 248704 | MOE430B_Mm_ENSG | 41.0 | 7341 | 41.6 | 7490 | 97.68 | 96.19 | 97.68 | 95.74 | 95.64 | 93.74 | C P | C P | O |
Mus_musculus | MoEx10stv1 | 4779314 | MoEx10stv1_Mm_ENSG | 26.1 | 25817 | 26.3 | 26165 | 98.57 | 97.93 | 96.39 | 95.10 | 88.33 | 87.15 | C P | C P | O |
Mus_musculus | Mouse4302 | 496468 | Mouse4302_Mm_ENSG | 56.9 | 16996 | 57.3 | 17149 | 98.60 | 97.88 | 98.61 | 97.73 | 96.41 | 95.54 | C P | C P | O |
Mus_musculus | Mouse430A2 | 249958 | Mouse430A2_Mm_ENSG | 72.5 | 12138 | 72.7 | 12142 | 99.12 | 98.86 | 98.99 | 98.96 | 97.72 | 97.69 | C P | C P | O |
Mus_musculus | Mu11KsubA | 131280 | Mu11KsubA_Mm_ENSG | 62.9 | 4338 | 62.9 | 4335 | 99.04 | 99.06 | 98.85 | 98.92 | 98.13 | 98.20 | C P | C P | O |
Mus_musculus | Mu11KsubB | 119580 | Mu11KsubB_Mm_ENSG | 47.1 | 2842 | 47.3 | 2844 | 99.37 | 99.13 | 99.05 | 98.98 | 97.78 | 97.71 | C P | C P | O |
Mus_musculus | NuGOMm1a520177 | 262909 | NuGOMm1a520177_Mm_ENSG | 66.6 | 16625 | 66.8 | 16683 | 98.65 | 98.37 | 97.67 | 97.33 | 96.83 | 96.49 | C P | C P | O |
Mus_musculus | gnGNF1Musa | 362266 | gnGNF1Musa_Mm_ENSG | 53.3 | 17002 | 53.9 | 17200 | 98.53 | 97.37 | 98.21 | 97.08 | 96.81 | 95.70 | C P | C P | O |
Mus_musculus | mogene10st | 819132 | mogene10st_Mm_ENSG | 76.5 | 22312 | 76.6 | 22309 | 98.75 | 98.63 | 96.61 | 96.62 | 91.98 | 91.99 | C P | C P | O |
Mus_musculus | mogene11st | 828268 | mogene11st_Mm_ENSG | 75.4 | 22307 | 75.5 | 22305 | 98.76 | 98.63 | 96.62 | 96.62 | 91.99 | 92.00 | C P | C P | O |
Oryctolagus_cuniculus | Rabbit2a520535F | 226371 | Rabbit2a520535F_Oc_ENSG | 41.9 | 9852 | C P | C P | O | ||||||||
Rattus_norvegicus | HTRat230PM | 351132 | HTRat230PM_Rn_ENSG | 37.1 | 11196 | 37.0 | 11194 | 99.84 | 100.00 | 99.98 | 100.00 | 98.37 | 98.39 | C P | C P | O |
Rattus_norvegicus | HTRatFocus | 266962 | HTRatFocus_Rn_ENSG | 47.2 | 10964 | 47.1 | 10962 | 99.84 | 100.00 | 99.98 | 100.00 | 98.42 | 98.44 | C P | C P | O |
Rattus_norvegicus | RAE230A | 175477 | RAE230A_Rn_ENSG | 50.2 | 8299 | 50.1 | 8297 | 99.85 | 100.00 | 99.98 | 100.00 | 98.57 | 98.59 | C P | C P | O |
Rattus_norvegicus | RAE230B | 168984 | RAE230B_Rn_ENSG | 25.2 | 3872 | 25.2 | 3872 | 99.83 | 99.99 | 100.00 | 100.00 | 98.37 | 98.37 | C P | C P | O |
Rattus_norvegicus | RGU34A | 140317 | RGU34A_Rn_ENSG | 52.6 | 4108 | 52.5 | 4107 | 99.78 | 99.99 | 99.98 | 100.00 | 97.52 | 97.54 | C P | C P | O |
Rattus_norvegicus | RGU34B | 140312 | RGU34B_Rn_ENSG | 30.8 | 2898 | 30.7 | 2897 | 99.81 | 100.00 | 99.97 | 100.00 | 98.03 | 98.07 | C P | C P | O |
Rattus_norvegicus | RGU34C | 140284 | RGU34C_Rn_ENSG | 33.4 | 3238 | 33.3 | 3237 | 99.75 | 99.99 | 99.97 | 100.00 | 97.81 | 97.84 | C P | C P | O |
Rattus_norvegicus | RNU34 | 21305 | RNU34_Rn_ENSG | 65.0 | 697 | 64.9 | 697 | 99.75 | 99.99 | 100.00 | 100.00 | 96.99 | 96.99 | C P | C P | O |
Rattus_norvegicus | RTU34 | 20464 | RTU34_Rn_ENSG | 54.1 | 503 | 54.0 | 503 | 99.78 | 100.00 | 100.00 | 100.00 | 98.01 | 98.01 | C P | C P | O |
Rattus_norvegicus | RaEx10stv1 | 4108266 | RaEx10stv1_Rn_ENSG | 21.2 | 21797 | 21.2 | 21795 | 99.99 | 100.00 | 99.99 | 100.00 | 99.93 | 99.94 | C P | C P | O |
Rattus_norvegicus | Rat2302 | 342410 | Rat2302_Rn_ENSG | 38.0 | 11196 | 37.9 | 11194 | 99.84 | 100.00 | 99.98 | 100.00 | 98.37 | 98.39 | C P | C P | O |
Rattus_norvegicus | RatToxFX | 24535 | RatToxFX_Rn_ENSG | 49.6 | 1257 | 49.5 | 1257 | 99.84 | 100.00 | 100.00 | 100.00 | 98.41 | 98.41 | C P | C P | O |
Rattus_norvegicus | ragene10st | 777760 | ragene10st_Rn_ENSG | 73.4 | 23109 | 73.4 | 23109 | 100.00 | 100.00 | 100.00 | 100.00 | 99.97 | 99.97 | C P | C P | O |
Rattus_norvegicus | ragene11st | 788189 | ragene11st_Rn_ENSG | 72.3 | 23105 | 72.3 | 23105 | 100.00 | 100.00 | 100.00 | 100.00 | 99.97 | 99.97 | C P | C P | O |
Saccharomyces_cerevisiae | YGS98 | 138412 | YGS98_Sc_ENSG | 74.3 | 6131 | 74.3 | 6131 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Saccharomyces_cerevisiae | Yeast2 | 120855 | Yeast2_Sc_ENSG | 51.0 | 5567 | 51.0 | 5567 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Sus_scrofa | Porcine | 265635 | Porcine_Ss_ENSG | 34.3 | 7352 | 18.0 | 4636 | 43.66 | 83.08 | 51.33 | 81.41 | 29.56 | 46.87 | C P | C P | O |
Sus_scrofa | SNOWBALLs520824F | 1093229 | SNOWBALLs520824F_Ss_ENSG | 29.8 | 15166 | 26.0 | 14251 | 68.42 | 78.44 | 72.62 | 77.28 | 32.42 | 34.50 | C P | C P | O |
Sus_scrofa | porgene10st | 595966 | porgene10st_Ss_ENSG | 60.0 | 16911 | 58.2 | 15818 | 76.27 | 78.60 | 70.90 | 75.80 | 34.92 | 37.34 | C P | C P | O |
Sus_scrofa | porgene11st | 595966 | porgene11st_Ss_ENSG | 60.0 | 16911 | 58.2 | 15818 | 76.27 | 78.60 | 70.90 | 75.80 | 34.92 | 37.34 | C P | C P | O |