Species | Chip | Original Probe Count | Custom CDF Name | Statistics of Current Version |
Statistics of Previous Version |
% of Common Probes in Version |
% of Common Probesets in Version |
% of Identical Probesets in Version |
R Packages | CDF Seq Map Desc | ||||||
Probe % | Probeset # | Probe % | Probeset # | Current | Previous | Current | Previous | Current | Previous | Source | Win32 | |||||
Bos_taurus | Bovine | 265627 | Bovine_Bt_ENSG | 39.4 | 9003 | 39.3 | 9001 | 99.87 | 100.00 | 99.98 | 100.00 | 98.70 | 98.72 | C P | C P | O |
Bos_taurus | bovgene10st | 557951 | bovgene10st_Bt_ENSG | 72.4 | 18904 | 72.4 | 18904 | 99.99 | 100.00 | 100.00 | 100.00 | 99.94 | 99.94 | C P | C P | O |
Bos_taurus | bovgene11st | 557951 | bovgene11st_Bt_ENSG | 72.4 | 18904 | 72.4 | 18904 | 99.99 | 100.00 | 100.00 | 100.00 | 99.94 | 99.94 | C P | C P | O |
Caenorhabditis_elegans | Celegans | 249165 | Celegans_Ce_ENSG | 79.6 | 17488 | 79.6 | 17488 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Canis_familiaris | Canine2 | 473162 | Canine2_Cf_ENSG | 49.0 | 15843 | 49.0 | 15843 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Canis_familiaris | Canine2PM | 486081 | Canine2PM_Cf_ENSG | 47.7 | 15843 | 47.7 | 15843 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Canis_familiaris | cangene10st | 657153 | cangene10st_Cf_ENSG | 65.3 | 19776 | 65.3 | 19776 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Canis_familiaris | cangene11st | 621953 | cangene11st_Cf_ENSG | 69.0 | 19776 | 69.0 | 19776 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Danio_rerio | Zebrafish | 249752 | Zebrafish_Dr_ENSG | 56.5 | 8705 | 56.4 | 8693 | 99.77 | 99.94 | 99.79 | 99.93 | 99.61 | 99.75 | C P | C P | O |
Danio_rerio | zebgene10st | 1245559 | zebgene10st_Dr_ENSG | 46.2 | 24543 | 46.2 | 24580 | 99.74 | 99.87 | 99.91 | 99.76 | 99.25 | 99.10 | C P | C P | O |
Danio_rerio | zebgene11st | 1245558 | zebgene11st_Dr_ENSG | 46.2 | 24543 | 46.2 | 24580 | 99.74 | 99.87 | 99.91 | 99.76 | 99.25 | 99.10 | C P | C P | O |
Drosophila_melanogaster | DrosGenome1 | 195994 | DrosGenome1_Dm_ENSG | 89.0 | 11357 | 89.2 | 11428 | 99.56 | 99.32 | 98.72 | 98.11 | 98.04 | 97.43 | C P | C P | O |
Drosophila_melanogaster | Drosophila2 | 265400 | Drosophila2_Dm_ENSG | 68.9 | 12342 | 69.1 | 12405 | 99.25 | 99.02 | 98.54 | 98.04 | 96.43 | 95.94 | C P | C P | O |
Equus_caballus | equgene10st | 537520 | equgene10st_EQca_ENSG | 83.3 | 22407 | 83.3 | 22407 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Equus_caballus | equgene11st | 543179 | equgene11st_EQca_ENSG | 82.5 | 22407 | 82.5 | 22407 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Gallus_gallus | Chicken | 424097 | Chicken_Gg_ENSG | 37.5 | 11824 | 37.5 | 11824 | 99.99 | 100.00 | 100.00 | 100.00 | 99.86 | 99.86 | C P | C P | O |
Gallus_gallus | chigene10st | 464100 | chigene10st_Gg_ENSG | 82.8 | 15490 | 82.8 | 15490 | 99.99 | 100.00 | 100.00 | 100.00 | 99.93 | 99.93 | C P | C P | O |
Gallus_gallus | chigene11st | 464100 | chigene11st_Gg_ENSG | 82.8 | 15490 | 82.8 | 15490 | 99.99 | 100.00 | 100.00 | 100.00 | 99.93 | 99.93 | C P | C P | O |
Homo_sapiens | HCG110 | 30313 | HCG110_Hs_ENSG | 70.3 | 1247 | 70.3 | 1252 | 99.58 | 99.48 | 99.84 | 99.44 | 97.91 | 97.52 | C P | C P | O |
Homo_sapiens | HGFocus | 98149 | HGFocus_Hs_ENSG | 76.4 | 7559 | 76.6 | 7585 | 99.67 | 99.36 | 99.74 | 99.39 | 98.49 | 98.15 | C P | C P | O |
Homo_sapiens | HGU133A | 247965 | HGU133A_Hs_ENSG | 69.8 | 11858 | 69.7 | 11859 | 99.24 | 99.38 | 99.44 | 99.44 | 97.55 | 97.54 | C P | C P | O |
Homo_sapiens | HGU133A2 | 247899 | HGU133A2_Hs_ENSG | 69.8 | 11858 | 69.7 | 11859 | 99.24 | 99.38 | 99.44 | 99.44 | 97.55 | 97.54 | C P | C P | O |
Homo_sapiens | HGU133B | 249502 | HGU133B_Hs_ENSG | 47.7 | 8602 | 47.0 | 8484 | 97.71 | 99.18 | 97.72 | 99.08 | 95.94 | 97.28 | C P | C P | O |
Homo_sapiens | HGU133Plus2 | 604258 | HGU133Plus2_Hs_ENSG | 57.2 | 19688 | 56.6 | 19536 | 98.29 | 99.27 | 98.54 | 99.31 | 95.80 | 96.55 | C P | C P | O |
Homo_sapiens | HGU219 | 548517 | HGU219_Hs_ENSG | 76.5 | 17681 | 76.5 | 17737 | 99.37 | 99.31 | 99.58 | 99.26 | 97.81 | 97.50 | C P | C P | O |
Homo_sapiens | HGU95A | 201807 | HGU95A_Hs_ENSG | 71.5 | 8134 | 71.6 | 8154 | 99.52 | 99.43 | 99.67 | 99.42 | 98.27 | 98.03 | C P | C P | O |
Homo_sapiens | HGU95Av2 | 201800 | HGU95Av2_Hs_ENSG | 71.5 | 8134 | 71.6 | 8154 | 99.52 | 99.43 | 99.67 | 99.42 | 98.27 | 98.03 | C P | C P | O |
Homo_sapiens | HGU95B | 201862 | HGU95B_Hs_ENSG | 53.5 | 5881 | 53.3 | 5858 | 98.62 | 99.01 | 98.64 | 99.03 | 97.43 | 97.81 | C P | C P | O |
Homo_sapiens | HGU95C | 201867 | HGU95C_Hs_ENSG | 39.6 | 4627 | 39.1 | 4569 | 98.00 | 99.36 | 97.99 | 99.23 | 96.30 | 97.53 | C P | C P | O |
Homo_sapiens | HGU95D | 201858 | HGU95D_Hs_ENSG | 25.9 | 3400 | 25.3 | 3323 | 96.65 | 99.30 | 96.97 | 99.22 | 95.26 | 97.47 | C P | C P | O |
Homo_sapiens | HGU95E | 201863 | HGU95E_Hs_ENSG | 39.5 | 4572 | 38.6 | 4481 | 97.11 | 99.33 | 97.27 | 99.24 | 95.58 | 97.52 | C P | C P | O |
Homo_sapiens | HTHGU133A | 247899 | HTHGU133A_Hs_ENSG | 69.8 | 11858 | 69.7 | 11859 | 99.24 | 99.38 | 99.44 | 99.44 | 97.55 | 97.54 | C P | C P | O |
Homo_sapiens | HTHGU133B | 249803 | HTHGU133B_Hs_ENSG | 47.7 | 8602 | 47.0 | 8484 | 97.71 | 99.18 | 97.72 | 99.08 | 95.94 | 97.28 | C P | C P | O |
Homo_sapiens | HTHGU133PlusPM | 528052 | HTHGU133PlusPM_Hs_ENSG | 57.6 | 19579 | 57.1 | 19429 | 98.40 | 99.28 | 98.55 | 99.31 | 96.01 | 96.75 | C P | C P | O |
Homo_sapiens | Hu6800 | 131541 | Hu6800_Hs_ENSG | 70.4 | 5010 | 70.3 | 5011 | 99.49 | 99.65 | 99.60 | 99.58 | 97.68 | 97.67 | C P | C P | O |
Homo_sapiens | HuEx10stv2 | 5431924 | HuEx10stv2_Hs_ENSG | 29.5 | 37923 | 29.0 | 37217 | 97.96 | 99.44 | 97.51 | 99.36 | 93.11 | 94.87 | C P | C P | O |
Homo_sapiens | Mapping10KXba142 | 213380 | Mapping10KXba142_Hs_ENSG | 1.1 | 217 | 1.0 | 205 | 88.94 | 99.52 | 94.01 | 99.51 | 84.33 | 89.27 | C P | C P | O |
Homo_sapiens | Mapping250KNsp | 3236396 | Mapping250KNsp_Hs_ENSG | 1.4 | 4945 | 1.3 | 4724 | 91.49 | 99.47 | 94.92 | 99.36 | 86.57 | 90.62 | C P | C P | O |
Homo_sapiens | Mapping250KSty | 3236180 | Mapping250KSty_Hs_ENSG | 1.9 | 5906 | 1.7 | 5649 | 91.23 | 99.51 | 95.14 | 99.47 | 85.73 | 89.63 | C P | C P | O |
Homo_sapiens | Mapping50KHind240 | 1144880 | Mapping50KHind240_Hs_ENSG | 1.6 | 1517 | 1.5 | 1483 | 92.29 | 99.63 | 97.43 | 99.66 | 86.68 | 88.67 | C P | C P | O |
Homo_sapiens | Mapping50KXba240 | 1179200 | Mapping50KXba240_Hs_ENSG | 1.3 | 1272 | 1.2 | 1239 | 92.01 | 99.64 | 96.93 | 99.52 | 87.34 | 89.67 | C P | C P | O |
Homo_sapiens | NuGOHs1a520180 | 265687 | NuGOHs1a520180_Hs_ENSG | 72.8 | 17397 | 72.4 | 17332 | 98.73 | 99.20 | 98.89 | 99.26 | 97.67 | 98.03 | C P | C P | O |
Homo_sapiens | PrimeView | 501271 | PrimeView_Hs_ENSG | 79.0 | 17663 | 79.0 | 17718 | 99.38 | 99.30 | 99.58 | 99.27 | 97.81 | 97.51 | C P | C P | O |
Homo_sapiens | U133AAofAv2 | 259234 | U133AAofAv2_Hs_ENSG | 67.0 | 11858 | 66.9 | 11859 | 99.24 | 99.38 | 99.44 | 99.44 | 97.55 | 97.54 | C P | C P | O |
Homo_sapiens | U133X3P | 673904 | U133X3P_Hs_ENSG | 56.1 | 19579 | 55.5 | 19432 | 98.17 | 99.20 | 98.55 | 99.30 | 96.10 | 96.82 | C P | C P | O |
Homo_sapiens | Xcel | 1324676 | Xcel_Hs_ENSG | 45.7 | 22421 | 45.0 | 22152 | 97.74 | 99.27 | 98.12 | 99.31 | 94.51 | 95.65 | C P | C P | O |
Homo_sapiens | gnGNF1Ba | 250925 | gnGNF1Ba_Hs_ENSG | 31.0 | 5789 | 30.9 | 5758 | 98.71 | 99.17 | 98.48 | 99.01 | 97.34 | 97.86 | C P | C P | O |
Homo_sapiens | hta20 | 7577330 | hta20_Hs_ENSG | 52.7 | 35816 | C P | C P | O | ||||||||
Homo_sapiens | hugene10st | 788904 | hugene10st_Hs_ENSG | 76.6 | 22031 | 76.5 | 21996 | 99.19 | 99.24 | 99.20 | 99.36 | 96.83 | 96.99 | C P | C P | O |
Homo_sapiens | hugene11st | 803478 | hugene11st_Hs_ENSG | 75.1 | 22005 | 75.0 | 21971 | 99.19 | 99.24 | 99.20 | 99.36 | 96.84 | 96.99 | C P | C P | O |
Homo_sapiens | hugene20st | 1022045 | hugene20st_Hs_ENSG | 64.3 | 32718 | 64.1 | 32633 | 98.98 | 99.30 | 99.07 | 99.33 | 96.98 | 97.23 | C P | C P | O |
Homo_sapiens | hugene21st | 1022045 | hugene21st_Hs_ENSG | 64.3 | 32718 | 64.1 | 32633 | 98.98 | 99.30 | 99.07 | 99.33 | 96.98 | 97.23 | C P | C P | O |
Macaca_mulatta | Rhesus | 668485 | Rhesus_MAmu_ENSG | 35.0 | 13485 | 35.0 | 13485 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Macaca_mulatta | rhegene10st | 810924 | rhegene10st_MAmu_ENSG | 63.7 | 24175 | 63.7 | 24175 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Macaca_mulatta | rhegene11st | 810924 | rhegene11st_MAmu_ENSG | 63.7 | 24175 | 63.7 | 24175 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Mus_musculus | HTMG430A | 250325 | HTMG430A_Mm_ENSG | 72.4 | 12140 | 72.4 | 12138 | 99.81 | 99.74 | 99.81 | 99.83 | 98.81 | 98.83 | C P | C P | O |
Mus_musculus | HTMG430B | 249071 | HTMG430B_Mm_ENSG | 41.8 | 7544 | 40.9 | 7341 | 97.61 | 99.77 | 97.07 | 99.75 | 96.62 | 99.29 | C P | C P | O |
Mus_musculus | HTMG430PM | 505190 | HTMG430PM_Mm_ENSG | 56.4 | 17204 | 55.9 | 16996 | 99.00 | 99.75 | 98.60 | 99.81 | 97.67 | 98.87 | C P | C P | O |
Mus_musculus | MGU74A | 201964 | MGU74A_Mm_ENSG | 54.4 | 7080 | 54.5 | 7081 | 99.83 | 99.69 | 99.83 | 99.82 | 98.18 | 98.16 | C P | C P | O |
Mus_musculus | MGU74Av2 | 197993 | MGU74Av2_Mm_ENSG | 62.4 | 7819 | 62.5 | 7822 | 99.85 | 99.72 | 99.87 | 99.83 | 98.32 | 98.29 | C P | C P | O |
Mus_musculus | MGU74Bv2 | 197131 | MGU74Bv2_Mm_ENSG | 59.4 | 6469 | 59.1 | 6438 | 99.41 | 99.76 | 99.32 | 99.80 | 98.36 | 98.84 | C P | C P | O |
Mus_musculus | MGU74Cv2 | 182797 | MGU74Cv2_Mm_ENSG | 28.1 | 3671 | 27.6 | 3607 | 98.11 | 99.75 | 98.01 | 99.75 | 97.03 | 98.75 | C P | C P | O |
Mus_musculus | MOE430A | 249958 | MOE430A_Mm_ENSG | 72.5 | 12140 | 72.5 | 12138 | 99.81 | 99.74 | 99.81 | 99.83 | 98.81 | 98.83 | C P | C P | O |
Mus_musculus | MOE430B | 248704 | MOE430B_Mm_ENSG | 41.9 | 7544 | 41.0 | 7341 | 97.61 | 99.77 | 97.07 | 99.75 | 96.62 | 99.29 | C P | C P | O |
Mus_musculus | MoEx10stv1 | 4779314 | MoEx10stv1_Mm_ENSG | 26.4 | 26500 | 26.1 | 25817 | 98.93 | 99.84 | 97.15 | 99.72 | 96.66 | 99.22 | C P | C P | O |
Mus_musculus | Mouse4302 | 496468 | Mouse4302_Mm_ENSG | 57.3 | 17204 | 56.9 | 16996 | 99.00 | 99.75 | 98.60 | 99.81 | 97.67 | 98.87 | C P | C P | O |
Mus_musculus | Mouse430A2 | 249958 | Mouse430A2_Mm_ENSG | 72.5 | 12140 | 72.5 | 12138 | 99.81 | 99.74 | 99.81 | 99.83 | 98.81 | 98.83 | C P | C P | O |
Mus_musculus | Mu11KsubA | 131280 | Mu11KsubA_Mm_ENSG | 62.6 | 4334 | 62.9 | 4338 | 99.83 | 99.45 | 99.86 | 99.77 | 96.98 | 96.89 | C P | C P | O |
Mus_musculus | Mu11KsubB | 119580 | Mu11KsubB_Mm_ENSG | 47.1 | 2842 | 47.1 | 2842 | 99.81 | 99.65 | 99.79 | 99.79 | 96.38 | 96.38 | C P | C P | O |
Mus_musculus | NuGOMm1a520177 | 262909 | NuGOMm1a520177_Mm_ENSG | 67.0 | 16714 | 66.6 | 16625 | 99.28 | 99.78 | 99.32 | 99.85 | 98.80 | 99.33 | C P | C P | O |
Mus_musculus | gnGNF1Musa | 362266 | gnGNF1Musa_Mm_ENSG | 53.9 | 17215 | 53.3 | 17002 | 98.62 | 99.69 | 98.55 | 99.79 | 97.35 | 98.56 | C P | C P | O |
Mus_musculus | mogene10st | 819132 | mogene10st_Mm_ENSG | 76.6 | 22369 | 76.5 | 22312 | 99.49 | 99.67 | 99.39 | 99.64 | 99.16 | 99.42 | C P | C P | O |
Mus_musculus | mogene11st | 828268 | mogene11st_Mm_ENSG | 75.6 | 22364 | 75.4 | 22307 | 99.48 | 99.68 | 99.39 | 99.64 | 99.16 | 99.42 | C P | C P | O |
Mus_musculus | mogene20st | 767405 | mogene20st_Mm_ENSG | 73.9 | 27835 | C P | C P | O | ||||||||
Mus_musculus | mogene21st | 767405 | mogene21st_Mm_ENSG | 73.9 | 27835 | C P | C P | O | ||||||||
Oryctolagus_cuniculus | Rabbit2a520535F | 226371 | Rabbit2a520535F_Oc_ENSG | 41.9 | 9852 | 41.9 | 9852 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Rattus_norvegicus | HTRat230PM | 351132 | HTRat230PM_Rn_ENSG | 38.2 | 11433 | 37.1 | 11196 | 87.14 | 89.70 | 88.98 | 90.86 | 75.88 | 77.48 | C P | C P | O |
Rattus_norvegicus | HTRatFocus | 266962 | HTRatFocus_Rn_ENSG | 48.0 | 11093 | 47.2 | 10964 | 88.36 | 89.87 | 89.89 | 90.95 | 76.90 | 77.81 | C P | C P | O |
Rattus_norvegicus | RAE230A | 175477 | RAE230A_Rn_ENSG | 51.5 | 8469 | 50.2 | 8299 | 87.97 | 90.37 | 89.01 | 90.83 | 78.57 | 80.18 | C P | C P | O |
Rattus_norvegicus | RAE230B | 168984 | RAE230B_Rn_ENSG | 26.1 | 3973 | 25.2 | 3872 | 85.43 | 88.39 | 87.24 | 89.51 | 74.88 | 76.83 | C P | C P | O |
Rattus_norvegicus | RGU34A | 140317 | RGU34A_Rn_ENSG | 53.6 | 4179 | 52.6 | 4108 | 89.01 | 90.70 | 88.87 | 90.41 | 75.93 | 77.24 | C P | C P | O |
Rattus_norvegicus | RGU34B | 140312 | RGU34B_Rn_ENSG | 32.1 | 3000 | 30.8 | 2898 | 86.06 | 89.87 | 86.77 | 89.82 | 77.97 | 80.71 | C P | C P | O |
Rattus_norvegicus | RGU34C | 140284 | RGU34C_Rn_ENSG | 34.8 | 3331 | 33.4 | 3238 | 86.40 | 90.02 | 87.33 | 89.84 | 78.17 | 80.42 | C P | C P | O |
Rattus_norvegicus | RNU34 | 21305 | RNU34_Rn_ENSG | 63.7 | 697 | 65.0 | 697 | 92.32 | 90.49 | 91.10 | 91.10 | 76.47 | 76.47 | C P | C P | O |
Rattus_norvegicus | RTU34 | 20464 | RTU34_Rn_ENSG | 55.3 | 505 | 54.1 | 503 | 88.80 | 90.62 | 90.10 | 90.46 | 74.06 | 74.35 | C P | C P | O |
Rattus_norvegicus | RaEx10stv1 | 4108266 | RaEx10stv1_Rn_ENSG | 20.8 | 20316 | 21.2 | 21797 | 90.08 | 88.43 | 89.42 | 83.34 | 50.22 | 46.81 | C P | C P | O |
Rattus_norvegicus | Rat2302 | 342410 | Rat2302_Rn_ENSG | 39.1 | 11433 | 38.0 | 11196 | 87.14 | 89.70 | 88.98 | 90.86 | 75.88 | 77.48 | C P | C P | O |
Rattus_norvegicus | RatToxFX | 24535 | RatToxFX_Rn_ENSG | 50.0 | 1264 | 49.6 | 1257 | 88.94 | 89.58 | 89.32 | 89.82 | 80.62 | 81.07 | C P | C P | O |
Rattus_norvegicus | ragene10st | 777760 | ragene10st_Rn_ENSG | 66.1 | 20060 | 73.4 | 23109 | 91.69 | 82.54 | 90.90 | 78.91 | 60.01 | 52.09 | C P | C P | O |
Rattus_norvegicus | ragene11st | 788189 | ragene11st_Rn_ENSG | 65.1 | 20060 | 72.3 | 23105 | 91.69 | 82.52 | 90.90 | 78.92 | 60.01 | 52.11 | C P | C P | O |
Rattus_norvegicus | ragene20st | 675529 | ragene20st_Rn_ENSG | 61.0 | 20319 | C P | C P | O | ||||||||
Rattus_norvegicus | ragene21st | 675529 | ragene21st_Rn_ENSG | 61.0 | 20319 | C P | C P | O | ||||||||
Saccharomyces_cerevisiae | YGS98 | 138412 | YGS98_Sc_ENSG | 74.3 | 6131 | 74.3 | 6131 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Saccharomyces_cerevisiae | Yeast2 | 120855 | Yeast2_Sc_ENSG | 51.0 | 5567 | 51.0 | 5567 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Sus_scrofa | Porcine | 265635 | Porcine_Ss_ENSG | 35.1 | 7434 | 34.3 | 7352 | 97.09 | 99.17 | 98.35 | 99.44 | 95.90 | 96.97 | C P | C P | O |
Sus_scrofa | SNOWBALLs520824F | 1093229 | SNOWBALLs520824F_Ss_ENSG | 30.6 | 15246 | 29.8 | 15166 | 96.75 | 99.38 | 98.92 | 99.45 | 93.91 | 94.40 | C P | C P | O |
Sus_scrofa | porgene10st | 595966 | porgene10st_Ss_ENSG | 60.2 | 16902 | 60.0 | 16911 | 99.11 | 99.54 | 99.52 | 99.47 | 96.41 | 96.36 | C P | C P | O |
Sus_scrofa | porgene11st | 595966 | porgene11st_Ss_ENSG | 60.2 | 16902 | 60.0 | 16911 | 99.11 | 99.54 | 99.52 | 99.47 | 96.41 | 96.36 | C P | C P | O |