Species | Chip | Original Probe Count | Custom CDF Name | Statistics of Current Version |
Statistics of Previous Version |
% of Common Probes in Version |
% of Common Probesets in Version |
% of Identical Probesets in Version |
R Packages | CDF Seq Map Desc | ||||||
Probe % | Probeset # | Probe % | Probeset # | Current | Previous | Current | Previous | Current | Previous | Source | Win32 | |||||
Danio_rerio | Zebrafish | 249752 | Zebrafish_Dr_VEGAE | 43.1 | 12406 | 41.8 | 12035 | 96.86 | 99.89 | 96.65 | 99.63 | 96.46 | 99.43 | C P | C P | O |
Danio_rerio | zebgene10st | 1245559 | zebgene10st_Dr_VEGAE | 22.2 | 56796 | 21.3 | 54442 | 95.74 | 99.87 | 95.45 | 99.58 | 95.14 | 99.25 | C P | C P | O |
Danio_rerio | zebgene11st | 1245558 | zebgene11st_Dr_VEGAE | 22.2 | 56796 | 21.3 | 54442 | 95.74 | 99.87 | 95.45 | 99.58 | 95.14 | 99.25 | C P | C P | O |
Homo_sapiens | HCG110 | 30313 | HCG110_Hs_VEGAE | 70.8 | 5142 | 70.8 | 5160 | 99.86 | 99.84 | 98.33 | 97.98 | 98.06 | 97.71 | C P | C P | O |
Homo_sapiens | HGFocus | 98149 | HGFocus_Hs_VEGAE | 75.5 | 21677 | 75.3 | 21735 | 99.58 | 99.87 | 97.99 | 97.73 | 97.84 | 97.58 | C P | C P | O |
Homo_sapiens | HGU133A | 247965 | HGU133A_Hs_VEGAE | 69.9 | 42372 | 69.6 | 42519 | 99.15 | 99.53 | 97.94 | 97.60 | 97.59 | 97.25 | C P | C P | O |
Homo_sapiens | HGU133A2 | 247899 | HGU133A2_Hs_VEGAE | 69.9 | 42372 | 69.6 | 42519 | 99.15 | 99.53 | 97.94 | 97.60 | 97.59 | 97.25 | C P | C P | O |
Homo_sapiens | HGU133B | 249502 | HGU133B_Hs_VEGAE | 51.5 | 24127 | 48.8 | 23665 | 93.61 | 98.80 | 95.52 | 97.39 | 94.63 | 96.48 | C P | C P | O |
Homo_sapiens | HGU133Plus2 | 604258 | HGU133Plus2_Hs_VEGAE | 59.3 | 71712 | 58.1 | 71610 | 96.81 | 98.79 | 97.20 | 97.33 | 96.41 | 96.54 | C P | C P | O |
Homo_sapiens | HGU219 | 548517 | HGU219_Hs_VEGAE | 77.8 | 83759 | 77.1 | 83790 | 98.88 | 99.78 | 97.88 | 97.85 | 97.40 | 97.36 | C P | C P | O |
Homo_sapiens | HGU95A | 201807 | HGU95A_Hs_VEGAE | 73.8 | 27862 | 73.4 | 27969 | 99.11 | 99.70 | 98.00 | 97.63 | 97.56 | 97.19 | C P | C P | O |
Homo_sapiens | HGU95Av2 | 201800 | HGU95Av2_Hs_VEGAE | 73.8 | 27813 | 73.4 | 27920 | 99.11 | 99.70 | 98.00 | 97.62 | 97.56 | 97.18 | C P | C P | O |
Homo_sapiens | HGU95B | 201862 | HGU95B_Hs_VEGAE | 58.5 | 16562 | 55.9 | 16302 | 94.86 | 99.16 | 96.06 | 97.60 | 95.38 | 96.90 | C P | C P | O |
Homo_sapiens | HGU95C | 201867 | HGU95C_Hs_VEGAE | 43.8 | 12985 | 41.7 | 12741 | 94.35 | 99.05 | 95.56 | 97.39 | 94.99 | 96.81 | C P | C P | O |
Homo_sapiens | HGU95D | 201858 | HGU95D_Hs_VEGAE | 28.8 | 8716 | 27.0 | 8462 | 92.16 | 98.22 | 94.41 | 97.25 | 94.03 | 96.86 | C P | C P | O |
Homo_sapiens | HGU95E | 201863 | HGU95E_Hs_VEGAE | 42.6 | 13823 | 40.8 | 13593 | 94.68 | 98.87 | 95.88 | 97.51 | 95.45 | 97.06 | C P | C P | O |
Homo_sapiens | HTHGU133A | 247899 | HTHGU133A_Hs_VEGAE | 69.9 | 42372 | 69.6 | 42519 | 99.15 | 99.53 | 97.94 | 97.60 | 97.59 | 97.25 | C P | C P | O |
Homo_sapiens | HTHGU133B | 249803 | HTHGU133B_Hs_VEGAE | 51.4 | 24127 | 48.7 | 23665 | 93.61 | 98.80 | 95.52 | 97.39 | 94.63 | 96.48 | C P | C P | O |
Homo_sapiens | HTHGU133PlusPM | 528052 | HTHGU133PlusPM_Hs_VEGAE | 59.1 | 67465 | 58.0 | 67368 | 96.96 | 98.85 | 97.19 | 97.33 | 96.39 | 96.53 | C P | C P | O |
Homo_sapiens | Hu6800 | 131541 | Hu6800_Hs_VEGAE | 72.2 | 19210 | 72.2 | 19301 | 99.64 | 99.73 | 98.32 | 97.86 | 98.07 | 97.61 | C P | C P | O |
Homo_sapiens | Mapping10KXba142 | 213380 | Mapping10KXba142_Hs_VEGAE | 1.2 | 314 | 1.1 | 309 | 95.95 | 98.40 | 95.22 | 96.76 | 94.90 | 96.44 | C P | C P | O |
Homo_sapiens | Mapping250KNsp | 3236396 | Mapping250KNsp_Hs_VEGAE | 1.6 | 8897 | 1.5 | 8747 | 94.22 | 97.18 | 95.40 | 97.04 | 94.71 | 96.33 | C P | C P | O |
Homo_sapiens | Mapping250KSty | 3236180 | Mapping250KSty_Hs_VEGAE | 2.1 | 11140 | 2.0 | 11001 | 94.80 | 96.98 | 95.26 | 96.46 | 94.45 | 95.65 | C P | C P | O |
Homo_sapiens | Mapping50KHind240 | 1144880 | Mapping50KHind240_Hs_VEGAE | 1.8 | 2543 | 1.7 | 2494 | 93.79 | 97.42 | 94.85 | 96.71 | 94.22 | 96.07 | C P | C P | O |
Homo_sapiens | Mapping50KXba240 | 1179200 | Mapping50KXba240_Hs_VEGAE | 1.4 | 2036 | 1.4 | 1955 | 92.79 | 98.11 | 93.42 | 97.29 | 92.68 | 96.52 | C P | C P | O |
Homo_sapiens | NuGOHs1a520180 | 265687 | NuGOHs1a520180_Hs_VEGAE | 73.5 | 45057 | 72.7 | 45028 | 98.39 | 99.54 | 97.60 | 97.66 | 97.27 | 97.33 | C P | C P | O |
Homo_sapiens | PrimeView | 501271 | PrimeView_Hs_VEGAE | 80.1 | 82528 | 79.4 | 82559 | 98.83 | 99.78 | 97.88 | 97.84 | 97.40 | 97.36 | C P | C P | O |
Homo_sapiens | U133AAofAv2 | 259234 | U133AAofAv2_Hs_VEGAE | 67.1 | 42464 | 66.9 | 42611 | 99.15 | 99.53 | 97.94 | 97.60 | 97.59 | 97.25 | C P | C P | O |
Homo_sapiens | U133X3P | 673904 | U133X3P_Hs_VEGAE | 59.9 | 65396 | 58.8 | 65329 | 96.90 | 98.81 | 97.19 | 97.29 | 96.36 | 96.46 | C P | C P | O |
Homo_sapiens | Xcel | 1324676 | Xcel_Hs_VEGAE | 49.4 | 79426 | 48.1 | 79195 | 96.09 | 98.59 | 96.93 | 97.21 | 95.80 | 96.08 | C P | C P | O |
Homo_sapiens | gnGNF1Ba | 250925 | gnGNF1Ba_Hs_VEGAE | 30.4 | 19307 | 30.2 | 19270 | 98.88 | 99.56 | 97.53 | 97.72 | 97.27 | 97.45 | C P | C P | O |
Homo_sapiens | hta20 | 6745406 | hta20_Hs_VEGAE | 60.8 | 549154 | 60.9 | 550669 | 99.18 | 99.06 | 97.85 | 97.58 | 97.50 | 97.23 | C P | C P | O |
Homo_sapiens | huex10st | 5432522 | huex10st_Hs_VEGAE | 31.0 | 486456 | C P | C P | O | ||||||||
Homo_sapiens | hugene10st | 788904 | hugene10st_Hs_VEGAE | 50.7 | 138187 | 50.5 | 138212 | 99.17 | 99.55 | 97.94 | 97.92 | 97.67 | 97.65 | C P | C P | O |
Homo_sapiens | hugene11st | 803478 | hugene11st_Hs_VEGAE | 49.7 | 138132 | 49.5 | 138157 | 99.17 | 99.55 | 97.94 | 97.92 | 97.67 | 97.65 | C P | C P | O |
Homo_sapiens | hugene20st | 965365 | hugene20st_Hs_VEGAE | 46.8 | 120613 | 47.2 | 120615 | 98.71 | 98.03 | 97.50 | 97.50 | 97.15 | 97.15 | C P | C P | O |
Homo_sapiens | hugene21st | 965365 | hugene21st_Hs_VEGAE | 46.8 | 120613 | 47.2 | 120615 | 98.71 | 98.03 | 97.50 | 97.50 | 97.15 | 97.15 | C P | C P | O |
Mus_musculus | HTMG430A | 250325 | HTMG430A_Mm_VEGAE | 50.2 | 24649 | 49.5 | 24169 | 98.41 | 99.86 | 97.48 | 99.42 | 97.09 | 99.02 | C P | C P | O |
Mus_musculus | HTMG430B | 249071 | HTMG430B_Mm_VEGAE | 31.0 | 11957 | 30.1 | 11576 | 96.66 | 99.64 | 96.28 | 99.45 | 95.95 | 99.11 | C P | C P | O |
Mus_musculus | HTMG430PM | 505190 | HTMG430PM_Mm_VEGAE | 40.1 | 34935 | 39.3 | 34109 | 97.74 | 99.77 | 97.08 | 99.43 | 96.66 | 99.00 | C P | C P | O |
Mus_musculus | MGU74A | 201964 | MGU74A_Mm_VEGAE | 38.4 | 13163 | 37.9 | 12932 | 98.59 | 99.81 | 97.64 | 99.38 | 96.91 | 98.64 | C P | C P | O |
Mus_musculus | MGU74Av2 | 197993 | MGU74Av2_Mm_VEGAE | 44.2 | 14694 | 43.6 | 14435 | 98.52 | 99.83 | 97.66 | 99.41 | 96.97 | 98.71 | C P | C P | O |
Mus_musculus | MGU74Bv2 | 197131 | MGU74Bv2_Mm_VEGAE | 43.8 | 11416 | 42.8 | 11120 | 97.72 | 99.83 | 97.13 | 99.71 | 96.66 | 99.24 | C P | C P | O |
Mus_musculus | MGU74Cv2 | 182797 | MGU74Cv2_Mm_VEGAE | 21.5 | 5220 | 20.8 | 5025 | 96.59 | 99.78 | 95.69 | 99.40 | 94.89 | 98.57 | C P | C P | O |
Mus_musculus | MOE430A | 249958 | MOE430A_Mm_VEGAE | 50.3 | 24649 | 49.5 | 24169 | 98.41 | 99.86 | 97.48 | 99.42 | 97.09 | 99.02 | C P | C P | O |
Mus_musculus | MOE430B | 248704 | MOE430B_Mm_VEGAE | 31.1 | 11957 | 30.1 | 11576 | 96.66 | 99.64 | 96.28 | 99.45 | 95.95 | 99.11 | C P | C P | O |
Mus_musculus | Mouse4302 | 496468 | Mouse4302_Mm_VEGAE | 40.8 | 34935 | 40.0 | 34109 | 97.74 | 99.77 | 97.08 | 99.43 | 96.66 | 99.00 | C P | C P | O |
Mus_musculus | Mouse430A2 | 249958 | Mouse430A2_Mm_VEGAE | 50.3 | 24649 | 49.5 | 24169 | 98.41 | 99.86 | 97.48 | 99.42 | 97.09 | 99.02 | C P | C P | O |
Mus_musculus | Mu11KsubA | 131280 | Mu11KsubA_Mm_VEGAE | 45.1 | 7974 | 44.5 | 7816 | 98.32 | 99.70 | 97.45 | 99.42 | 96.16 | 98.11 | C P | C P | O |
Mus_musculus | Mu11KsubB | 119580 | Mu11KsubB_Mm_VEGAE | 33.0 | 7205 | 32.6 | 7133 | 98.57 | 99.75 | 98.22 | 99.21 | 97.04 | 98.02 | C P | C P | O |
Mus_musculus | NuGOMm1a520177 | 262909 | NuGOMm1a520177_Mm_VEGAE | 45.0 | 24315 | 44.2 | 23839 | 97.98 | 99.86 | 97.59 | 99.54 | 97.36 | 99.31 | C P | C P | O |
Mus_musculus | chogene20st | 667089 | chogene20st_Mm_VEGAE | 4.0 | 11127 | C P | C P | O | ||||||||
Mus_musculus | chogene21st | 667089 | chogene21st_Mm_VEGAE | 4.0 | 11127 | C P | C P | O | ||||||||
Mus_musculus | gnGNF1Musa | 362266 | gnGNF1Musa_Mm_VEGAE | 38.9 | 26175 | 38.0 | 25545 | 97.51 | 99.69 | 97.09 | 99.49 | 96.58 | 98.97 | C P | C P | O |
Mus_musculus | moex10st | 4779548 | moex10st_Mm_VEGAE | 20.2 | 266229 | C P | C P | O | ||||||||
Mus_musculus | mogene10st | 819132 | mogene10st_Mm_VEGAE | 38.5 | 100828 | 37.5 | 98845 | 97.17 | 99.84 | 97.44 | 99.39 | 97.37 | 99.32 | C P | C P | O |
Mus_musculus | mogene11st | 828268 | mogene11st_Mm_VEGAE | 37.9 | 100779 | 36.9 | 98796 | 97.16 | 99.84 | 97.44 | 99.39 | 97.37 | 99.32 | C P | C P | O |
Mus_musculus | mogene20st | 740483 | mogene20st_Mm_VEGAE | 34.0 | 70360 | 33.3 | 68925 | 97.63 | 99.68 | 97.46 | 99.49 | 97.36 | 99.39 | C P | C P | O |
Mus_musculus | mogene21st | 740484 | mogene21st_Mm_VEGAE | 34.0 | 70360 | 33.3 | 68925 | 97.63 | 99.68 | 97.46 | 99.49 | 97.36 | 99.39 | C P | C P | O |
Sus_scrofa | Porcine | 265635 | Porcine_Ss_VEGAE | 4.4 | 1985 | C P | C P | O | ||||||||
Sus_scrofa | SNOWBALLs520824F | 1093229 | SNOWBALLs520824F_Ss_VEGAE | 3.6 | 6732 | C P | C P | O | ||||||||
Sus_scrofa | porgene10st | 595966 | porgene10st_Ss_VEGAE | 4.4 | 7255 | C P | C P | O | ||||||||
Sus_scrofa | porgene11st | 595966 | porgene11st_Ss_VEGAE | 4.4 | 7255 | C P | C P | O |