Species | Chip | Original Probe Count | Custom CDF Name | Statistics of Current Version |
Statistics of Previous Version |
% of Common Probes in Version |
% of Common Probesets in Version |
% of Identical Probesets in Version |
R Packages | CDF Seq Map Desc | ||||||
Probe % | Probeset # | Probe % | Probeset # | Current | Previous | Current | Previous | Current | Previous | Source | Win32 | |||||
Canis_familiaris | Canine2 | 473162 | Canine2_Cf_VEGAT | 0.1 | 58 | 0.1 | 58 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Canis_familiaris | Canine2PM | 486081 | Canine2PM_Cf_VEGAT | 0.1 | 58 | 0.1 | 58 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Canis_familiaris | cangene10st | 621953 | cangene10st_Cf_VEGAT | 0.1 | 70 | 0.1 | 70 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Canis_familiaris | cangene11st | 621953 | cangene11st_Cf_VEGAT | 0.1 | 70 | 0.1 | 70 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Danio_rerio | Zebrafish | 249752 | Zebrafish_Dr_VEGAT | 47.4 | 9618 | 46.7 | 9442 | 98.52 | 99.96 | 98.07 | 99.89 | 97.83 | 99.65 | C P | C P | O |
Danio_rerio | zebgene10st | 1245559 | zebgene10st_Dr_VEGAT | 34.9 | 28949 | 34.3 | 28424 | 98.17 | 99.95 | 97.93 | 99.74 | 97.01 | 98.80 | C P | C P | O |
Danio_rerio | zebgene11st | 1245558 | zebgene11st_Dr_VEGAT | 34.9 | 28949 | 34.3 | 28424 | 98.17 | 99.95 | 97.93 | 99.74 | 97.01 | 98.80 | C P | C P | O |
Homo_sapiens | HCG110 | 30313 | HCG110_Hs_VEGAT | 79.2 | 5810 | 79.0 | 5763 | 99.75 | 100.00 | 98.67 | 99.48 | 98.47 | 99.27 | C P | C P | O |
Homo_sapiens | HGFocus | 98149 | HGFocus_Hs_VEGAT | 85.0 | 30748 | 84.8 | 30469 | 99.76 | 99.97 | 98.57 | 99.47 | 98.48 | 99.38 | C P | C P | O |
Homo_sapiens | HGU133A | 247965 | HGU133A_Hs_VEGAT | 77.8 | 53574 | 77.4 | 53055 | 99.38 | 99.92 | 98.52 | 99.49 | 98.26 | 99.22 | C P | C P | O |
Homo_sapiens | HGU133A2 | 247899 | HGU133A2_Hs_VEGAT | 77.8 | 53574 | 77.4 | 53055 | 99.40 | 99.92 | 98.52 | 99.49 | 98.26 | 99.22 | C P | C P | O |
Homo_sapiens | HGU133B | 249502 | HGU133B_Hs_VEGAT | 55.5 | 28185 | 52.7 | 27464 | 94.94 | 99.88 | 96.77 | 99.32 | 96.07 | 98.59 | C P | C P | O |
Homo_sapiens | HGU133Plus2 | 604258 | HGU133Plus2_Hs_VEGAT | 65.2 | 83859 | 63.7 | 82662 | 97.56 | 99.88 | 97.97 | 99.39 | 97.34 | 98.75 | C P | C P | O |
Homo_sapiens | HGU219 | 548517 | HGU219_Hs_VEGAT | 85.3 | 87356 | 84.7 | 86577 | 99.25 | 99.93 | 98.53 | 99.42 | 98.09 | 98.97 | C P | C P | O |
Homo_sapiens | HGU95A | 201807 | HGU95A_Hs_VEGAT | 79.1 | 34110 | 78.6 | 33804 | 99.34 | 99.93 | 98.53 | 99.42 | 98.24 | 99.12 | C P | C P | O |
Homo_sapiens | HGU95Av2 | 201800 | HGU95Av2_Hs_VEGAT | 79.1 | 34071 | 78.6 | 33765 | 99.34 | 99.93 | 98.53 | 99.42 | 98.23 | 99.12 | C P | C P | O |
Homo_sapiens | HGU95B | 201862 | HGU95B_Hs_VEGAT | 61.0 | 19590 | 58.6 | 19160 | 96.00 | 99.89 | 97.20 | 99.38 | 96.75 | 98.92 | C P | C P | O |
Homo_sapiens | HGU95C | 201867 | HGU95C_Hs_VEGAT | 46.2 | 15198 | 44.2 | 14780 | 95.50 | 99.88 | 96.62 | 99.36 | 96.26 | 98.98 | C P | C P | O |
Homo_sapiens | HGU95D | 201858 | HGU95D_Hs_VEGAT | 31.0 | 10409 | 29.1 | 10084 | 93.84 | 99.80 | 96.17 | 99.27 | 95.87 | 98.96 | C P | C P | O |
Homo_sapiens | HGU95E | 201863 | HGU95E_Hs_VEGAT | 45.6 | 15754 | 43.7 | 15408 | 95.65 | 99.80 | 97.11 | 99.29 | 96.64 | 98.81 | C P | C P | O |
Homo_sapiens | HTHGU133A | 247899 | HTHGU133A_Hs_VEGAT | 77.8 | 53574 | 77.4 | 53055 | 99.40 | 99.92 | 98.52 | 99.49 | 98.26 | 99.22 | C P | C P | O |
Homo_sapiens | HTHGU133B | 249803 | HTHGU133B_Hs_VEGAT | 55.4 | 28185 | 52.7 | 27464 | 94.97 | 99.88 | 96.77 | 99.32 | 96.07 | 98.59 | C P | C P | O |
Homo_sapiens | HTHGU133PlusPM | 528052 | HTHGU133PlusPM_Hs_VEGAT | 65.5 | 82325 | 64.1 | 81137 | 97.69 | 99.88 | 97.96 | 99.40 | 97.34 | 98.77 | C P | C P | O |
Homo_sapiens | Hu6800 | 131541 | Hu6800_Hs_VEGAT | 77.7 | 22700 | 77.6 | 22547 | 99.71 | 99.91 | 98.80 | 99.47 | 98.70 | 99.37 | C P | C P | O |
Homo_sapiens | Mapping10KXba142 | 213380 | Mapping10KXba142_Hs_VEGAT | 0.6 | 426 | 0.6 | 416 | 97.06 | 100.00 | 97.18 | 99.52 | 97.18 | 99.52 | C P | C P | O |
Homo_sapiens | Mapping250KNsp | 3236396 | Mapping250KNsp_Hs_VEGAT | 0.8 | 9567 | 0.7 | 9290 | 94.78 | 99.77 | 96.50 | 99.38 | 96.21 | 99.07 | C P | C P | O |
Homo_sapiens | Mapping250KSty | 3236180 | Mapping250KSty_Hs_VEGAT | 1.0 | 13206 | 1.0 | 12869 | 95.63 | 99.80 | 96.65 | 99.18 | 96.46 | 98.98 | C P | C P | O |
Homo_sapiens | Mapping50KHind240 | 1144880 | Mapping50KHind240_Hs_VEGAT | 0.9 | 3387 | 0.9 | 3272 | 94.44 | 99.75 | 96.10 | 99.48 | 95.84 | 99.21 | C P | C P | O |
Homo_sapiens | Mapping50KXba240 | 1179200 | Mapping50KXba240_Hs_VEGAT | 0.7 | 2599 | 0.7 | 2488 | 93.52 | 99.89 | 95.11 | 99.36 | 95.04 | 99.28 | C P | C P | O |
Homo_sapiens | NuGOHs1a520180 | 265687 | NuGOHs1a520180_Hs_VEGAT | 80.6 | 58968 | 79.8 | 58330 | 98.84 | 99.93 | 98.34 | 99.41 | 98.11 | 99.19 | C P | C P | O |
Homo_sapiens | PrimeView | 501271 | PrimeView_Hs_VEGAT | 88.1 | 87172 | 87.4 | 86393 | 99.23 | 99.93 | 98.54 | 99.42 | 98.09 | 98.98 | C P | C P | O |
Homo_sapiens | U133AAofAv2 | 259234 | U133AAofAv2_Hs_VEGAT | 74.7 | 53590 | 74.4 | 53072 | 99.40 | 99.92 | 98.52 | 99.48 | 98.26 | 99.22 | C P | C P | O |
Homo_sapiens | U133X3P | 673904 | U133X3P_Hs_VEGAT | 63.4 | 77126 | 62.0 | 76006 | 97.55 | 99.87 | 97.92 | 99.36 | 97.30 | 98.74 | C P | C P | O |
Homo_sapiens | Xcel | 1324676 | Xcel_Hs_VEGAT | 51.7 | 88594 | 50.2 | 87201 | 96.91 | 99.79 | 97.74 | 99.31 | 96.96 | 98.51 | C P | C P | O |
Homo_sapiens | gnGNF1Ba | 250925 | gnGNF1Ba_Hs_VEGAT | 35.4 | 21567 | 35.2 | 21389 | 99.24 | 99.92 | 98.53 | 99.35 | 98.34 | 99.16 | C P | C P | O |
Homo_sapiens | hta20 | 6745406 | hta20_Hs_VEGAT | 77.9 | 176201 | 77.7 | 173868 | 99.41 | 99.75 | 97.92 | 99.24 | 96.91 | 98.21 | C P | C P | O |
Homo_sapiens | huex10st | 5432522 | huex10st_Hs_VEGAT | 31.6 | 176952 | C P | C P | O | ||||||||
Homo_sapiens | hugene10st | 788904 | hugene10st_Hs_VEGAT | 74.1 | 133705 | 73.8 | 132561 | 99.54 | 99.93 | 98.58 | 99.43 | 98.14 | 98.98 | C P | C P | O |
Homo_sapiens | hugene11st | 803478 | hugene11st_Hs_VEGAT | 72.6 | 133691 | 72.4 | 132547 | 99.54 | 99.93 | 98.58 | 99.43 | 98.14 | 98.99 | C P | C P | O |
Homo_sapiens | hugene20st | 965365 | hugene20st_Hs_VEGAT | 67.7 | 150159 | 67.5 | 148489 | 99.20 | 99.52 | 98.17 | 99.28 | 97.62 | 98.72 | C P | C P | O |
Homo_sapiens | hugene21st | 965365 | hugene21st_Hs_VEGAT | 67.7 | 150159 | 67.5 | 148489 | 99.20 | 99.52 | 98.17 | 99.28 | 97.62 | 98.72 | C P | C P | O |
Mus_musculus | HTMG430A | 250325 | HTMG430A_Mm_VEGAT | 56.2 | 26802 | 55.4 | 25432 | 98.39 | 99.94 | 94.59 | 99.69 | 94.42 | 99.51 | C P | C P | O |
Mus_musculus | HTMG430B | 249071 | HTMG430B_Mm_VEGAT | 33.2 | 12739 | 32.0 | 12097 | 96.34 | 99.88 | 94.63 | 99.65 | 94.50 | 99.51 | C P | C P | O |
Mus_musculus | HTMG430PM | 505190 | HTMG430PM_Mm_VEGAT | 44.1 | 36599 | 43.1 | 34716 | 97.63 | 99.92 | 94.57 | 99.70 | 94.36 | 99.48 | C P | C P | O |
Mus_musculus | MGU74A | 201964 | MGU74A_Mm_VEGAT | 41.9 | 14497 | 41.3 | 13503 | 98.56 | 99.95 | 92.87 | 99.71 | 92.80 | 99.63 | C P | C P | O |
Mus_musculus | MGU74Av2 | 197993 | MGU74Av2_Mm_VEGAT | 48.0 | 16081 | 47.3 | 15051 | 98.50 | 99.95 | 93.34 | 99.73 | 93.26 | 99.64 | C P | C P | O |
Mus_musculus | MGU74Bv2 | 197131 | MGU74Bv2_Mm_VEGAT | 46.1 | 11974 | 45.0 | 11504 | 97.64 | 99.92 | 95.81 | 99.72 | 95.69 | 99.60 | C P | C P | O |
Mus_musculus | MGU74Cv2 | 182797 | MGU74Cv2_Mm_VEGAT | 22.3 | 5943 | 21.6 | 5643 | 96.49 | 99.87 | 94.60 | 99.63 | 94.55 | 99.57 | C P | C P | O |
Mus_musculus | MOE430A | 249958 | MOE430A_Mm_VEGAT | 56.3 | 26802 | 55.4 | 25432 | 98.39 | 99.94 | 94.59 | 99.69 | 94.42 | 99.51 | C P | C P | O |
Mus_musculus | MOE430B | 248704 | MOE430B_Mm_VEGAT | 33.3 | 12739 | 32.1 | 12097 | 96.34 | 99.88 | 94.63 | 99.65 | 94.50 | 99.51 | C P | C P | O |
Mus_musculus | Mouse4302 | 496468 | Mouse4302_Mm_VEGAT | 44.9 | 36599 | 43.9 | 34716 | 97.63 | 99.92 | 94.57 | 99.70 | 94.36 | 99.48 | C P | C P | O |
Mus_musculus | Mouse430A2 | 249958 | Mouse430A2_Mm_VEGAT | 56.3 | 26802 | 55.4 | 25432 | 98.39 | 99.94 | 94.59 | 99.69 | 94.42 | 99.51 | C P | C P | O |
Mus_musculus | Mu11KsubA | 131280 | Mu11KsubA_Mm_VEGAT | 47.8 | 8698 | 47.0 | 8124 | 98.33 | 99.89 | 93.04 | 99.62 | 92.96 | 99.53 | C P | C P | O |
Mus_musculus | Mu11KsubB | 119580 | Mu11KsubB_Mm_VEGAT | 37.9 | 7069 | 37.4 | 6673 | 98.61 | 99.98 | 94.21 | 99.81 | 94.14 | 99.73 | C P | C P | O |
Mus_musculus | NuGOMm1a520177 | 262909 | NuGOMm1a520177_Mm_VEGAT | 50.3 | 28106 | 49.3 | 26720 | 97.93 | 99.93 | 94.83 | 99.75 | 94.71 | 99.63 | C P | C P | O |
Mus_musculus | chogene20st | 667089 | chogene20st_Mm_VEGAT | 9.4 | 28543 | C P | C P | O | ||||||||
Mus_musculus | chogene21st | 667089 | chogene21st_Mm_VEGAT | 9.4 | 28543 | C P | C P | O | ||||||||
Mus_musculus | gnGNF1Musa | 362266 | gnGNF1Musa_Mm_VEGAT | 42.1 | 30046 | 41.1 | 28421 | 97.38 | 99.88 | 94.30 | 99.69 | 94.19 | 99.57 | C P | C P | O |
Mus_musculus | moex10st | 4779548 | moex10st_Mm_VEGAT | 20.5 | 73695 | C P | C P | O | ||||||||
Mus_musculus | mogene10st | 819132 | mogene10st_Mm_VEGAT | 53.6 | 62721 | 52.2 | 59587 | 97.39 | 99.94 | 94.74 | 99.72 | 94.50 | 99.47 | C P | C P | O |
Mus_musculus | mogene11st | 828268 | mogene11st_Mm_VEGAT | 52.9 | 62717 | 51.5 | 59583 | 97.38 | 99.94 | 94.74 | 99.72 | 94.50 | 99.47 | C P | C P | O |
Mus_musculus | mogene20st | 740483 | mogene20st_Mm_VEGAT | 52.1 | 65996 | 51.0 | 62835 | 97.73 | 99.86 | 94.92 | 99.70 | 94.65 | 99.41 | C P | C P | O |
Mus_musculus | mogene21st | 740484 | mogene21st_Mm_VEGAT | 52.1 | 65996 | 51.0 | 62835 | 97.73 | 99.86 | 94.92 | 99.70 | 94.65 | 99.41 | C P | C P | O |
Rattus_norvegicus | HTRat230PM | 351132 | HTRat230PM_Rn_VEGAT | 0.2 | 61 | C P | C P | O | ||||||||
Rattus_norvegicus | HTRatFocus | 266962 | HTRatFocus_Rn_VEGAT | 0.2 | 59 | C P | C P | O | ||||||||
Rattus_norvegicus | RAE230A | 175477 | RAE230A_Rn_VEGAT | 0.2 | 46 | C P | C P | O | ||||||||
Rattus_norvegicus | RAE230B | 168984 | RAE230B_Rn_VEGAT | 0.1 | 22 | C P | C P | O | ||||||||
Rattus_norvegicus | RGU34A | 140317 | RGU34A_Rn_VEGAT | 0.2 | 27 | C P | C P | O | ||||||||
Rattus_norvegicus | RGU34B | 140312 | RGU34B_Rn_VEGAT | 0.1 | 19 | C P | C P | O | ||||||||
Rattus_norvegicus | RGU34C | 140284 | RGU34C_Rn_VEGAT | 0.1 | 14 | C P | C P | O | ||||||||
Rattus_norvegicus | RNU34 | 21305 | RNU34_Rn_VEGAT | 0.2 | 3 | C P | C P | O | ||||||||
Rattus_norvegicus | RTU34 | 20464 | RTU34_Rn_VEGAT | 0.3 | 4 | C P | C P | O | ||||||||
Rattus_norvegicus | Rat2302 | 342410 | Rat2302_Rn_VEGAT | 0.2 | 61 | C P | C P | O | ||||||||
Rattus_norvegicus | RatToxFX | 24535 | RatToxFX_Rn_VEGAT | 0.4 | 9 | C P | C P | O | ||||||||
Rattus_norvegicus | raex10st | 4104558 | raex10st_Rn_VEGAT | 0.1 | 95 | C P | C P | O | ||||||||
Rattus_norvegicus | ragene10st | 777760 | ragene10st_Rn_VEGAT | 0.2 | 78 | C P | C P | O | ||||||||
Rattus_norvegicus | ragene11st | 788189 | ragene11st_Rn_VEGAT | 0.2 | 78 | C P | C P | O | ||||||||
Rattus_norvegicus | ragene20st | 660692 | ragene20st_Rn_VEGAT | 0.2 | 85 | C P | C P | O | ||||||||
Rattus_norvegicus | ragene21st | 660692 | ragene21st_Rn_VEGAT | 0.2 | 85 | C P | C P | O | ||||||||
Sus_scrofa | Porcine | 265635 | Porcine_Ss_VEGAT | 5.8 | 3007 | 5.2 | 2761 | 89.96 | 100.00 | 91.55 | 99.71 | 91.45 | 99.60 | C P | C P | O |
Sus_scrofa | SNOWBALLs520824F | 1093229 | SNOWBALLs520824F_Ss_VEGAT | 5.7 | 6562 | 5.2 | 6122 | 91.08 | 99.83 | 92.84 | 99.51 | 92.23 | 98.86 | C P | C P | O |
Sus_scrofa | porgene10st | 595966 | porgene10st_Ss_VEGAT | 7.4 | 6447 | 6.6 | 5979 | 88.72 | 99.85 | 92.34 | 99.57 | 91.90 | 99.10 | C P | C P | O |
Sus_scrofa | porgene11st | 595966 | porgene11st_Ss_VEGAT | 7.4 | 6447 | 6.6 | 5979 | 88.72 | 99.85 | 92.34 | 99.57 | 91.90 | 99.10 | C P | C P | O |