Affymetrix bovine annotation data (chip bovinebtrefseq)

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Documentation for package ‘bovinebtrefseq.db’ version 25.0.0

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bovinebtrefseq Bioconductor annotation data package
bovinebtrefseq.db Bioconductor annotation data package
bovinebtrefseqACCNUM Map Manufacturer identifiers to Accession Numbers
bovinebtrefseqALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
bovinebtrefseqCHR Map Manufacturer IDs to Chromosomes
bovinebtrefseqCHRLENGTHS A named vector for the length of each of the chromosomes
bovinebtrefseqCHRLOC Map Manufacturer IDs to Chromosomal Location
bovinebtrefseqCHRLOCEND Map Manufacturer IDs to Chromosomal Location
bovinebtrefseqENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
bovinebtrefseqENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
bovinebtrefseqENTREZID Map between Manufacturer Identifiers and Entrez Gene
bovinebtrefseqENZYME Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
bovinebtrefseqENZYME2PROBE Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
bovinebtrefseqGENENAME Map between Manufacturer IDs and Genes
bovinebtrefseqGO Maps between manufacturer IDs and Gene Ontology (GO) IDs
bovinebtrefseqGO2ALLPROBES Maps between manufacturer IDs and Gene Ontology (GO) IDs
bovinebtrefseqGO2PROBE Maps between manufacturer IDs and Gene Ontology (GO) IDs
bovinebtrefseqLOCUSID Map between Manufacturer Identifiers and Entrez Gene
bovinebtrefseqMAPCOUNTS Number of mapped keys for the maps in package bovinebtrefseq.db
bovinebtrefseqORGANISM The Organism information for bovinebtrefseq
bovinebtrefseqORGPKG The Organism information for bovinebtrefseq
bovinebtrefseqPATH Mappings between probe identifiers and KEGG pathway identifiers
bovinebtrefseqPATH2PROBE Mappings between probe identifiers and KEGG pathway identifiers
bovinebtrefseqPFAM Maps between Manufacturer Identifiers and PFAM Identifiers
bovinebtrefseqPMID Maps between Manufacturer Identifiers and PubMed Identifiers
bovinebtrefseqPMID2PROBE Maps between Manufacturer Identifiers and PubMed Identifiers
bovinebtrefseqPROSITE Maps between Manufacturer Identifiers and PROSITE Identifiers
bovinebtrefseqREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
bovinebtrefseqSYMBOL Map between Manufacturer Identifiers and Gene Symbols
bovinebtrefseqUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
bovinebtrefseqUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
bovinebtrefseqUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
bovinebtrefseq_dbconn Collect information about the package annotation DB
bovinebtrefseq_dbfile Collect information about the package annotation DB
bovinebtrefseq_dbInfo Collect information about the package annotation DB
bovinebtrefseq_dbschema Collect information about the package annotation DB