Affymetrix hgfocus annotation data (chip hgfocushsrefseq)


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Documentation for package ‘hgfocushsrefseq.db’ version 25.0.0

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hgfocushsrefseq Bioconductor annotation data package
hgfocushsrefseq.db Bioconductor annotation data package
hgfocushsrefseqACCNUM Map Manufacturer identifiers to Accession Numbers
hgfocushsrefseqALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
hgfocushsrefseqCHR Map Manufacturer IDs to Chromosomes
hgfocushsrefseqCHRLENGTHS A named vector for the length of each of the chromosomes
hgfocushsrefseqCHRLOC Map Manufacturer IDs to Chromosomal Location
hgfocushsrefseqCHRLOCEND Map Manufacturer IDs to Chromosomal Location
hgfocushsrefseqENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
hgfocushsrefseqENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
hgfocushsrefseqENTREZID Map between Manufacturer Identifiers and Entrez Gene
hgfocushsrefseqENZYME Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
hgfocushsrefseqENZYME2PROBE Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
hgfocushsrefseqGENENAME Map between Manufacturer IDs and Genes
hgfocushsrefseqGO Maps between manufacturer IDs and Gene Ontology (GO) IDs
hgfocushsrefseqGO2ALLPROBES Maps between manufacturer IDs and Gene Ontology (GO) IDs
hgfocushsrefseqGO2PROBE Maps between manufacturer IDs and Gene Ontology (GO) IDs
hgfocushsrefseqLOCUSID Map between Manufacturer Identifiers and Entrez Gene
hgfocushsrefseqMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
hgfocushsrefseqMAPCOUNTS Number of mapped keys for the maps in package hgfocushsrefseq.db
hgfocushsrefseqOMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
hgfocushsrefseqORGANISM The Organism information for hgfocushsrefseq
hgfocushsrefseqORGPKG The Organism information for hgfocushsrefseq
hgfocushsrefseqPATH Mappings between probe identifiers and KEGG pathway identifiers
hgfocushsrefseqPATH2PROBE Mappings between probe identifiers and KEGG pathway identifiers
hgfocushsrefseqPFAM Maps between Manufacturer Identifiers and PFAM Identifiers
hgfocushsrefseqPMID Maps between Manufacturer Identifiers and PubMed Identifiers
hgfocushsrefseqPMID2PROBE Maps between Manufacturer Identifiers and PubMed Identifiers
hgfocushsrefseqPROSITE Maps between Manufacturer Identifiers and PROSITE Identifiers
hgfocushsrefseqREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
hgfocushsrefseqSYMBOL Map between Manufacturer Identifiers and Gene Symbols
hgfocushsrefseqUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
hgfocushsrefseqUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
hgfocushsrefseqUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
hgfocushsrefseq_dbconn Collect information about the package annotation DB
hgfocushsrefseq_dbfile Collect information about the package annotation DB
hgfocushsrefseq_dbInfo Collect information about the package annotation DB
hgfocushsrefseq_dbschema Collect information about the package annotation DB