Affymetrix hugene21st annotation data (chip hugene21sthsrefseq)


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Documentation for package ‘hugene21sthsrefseq.db’ version 25.0.0

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hugene21sthsrefseq Bioconductor annotation data package
hugene21sthsrefseq.db Bioconductor annotation data package
hugene21sthsrefseqACCNUM Map Manufacturer identifiers to Accession Numbers
hugene21sthsrefseqALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
hugene21sthsrefseqCHR Map Manufacturer IDs to Chromosomes
hugene21sthsrefseqCHRLENGTHS A named vector for the length of each of the chromosomes
hugene21sthsrefseqCHRLOC Map Manufacturer IDs to Chromosomal Location
hugene21sthsrefseqCHRLOCEND Map Manufacturer IDs to Chromosomal Location
hugene21sthsrefseqENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
hugene21sthsrefseqENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
hugene21sthsrefseqENTREZID Map between Manufacturer Identifiers and Entrez Gene
hugene21sthsrefseqENZYME Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
hugene21sthsrefseqENZYME2PROBE Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
hugene21sthsrefseqGENENAME Map between Manufacturer IDs and Genes
hugene21sthsrefseqGO Maps between manufacturer IDs and Gene Ontology (GO) IDs
hugene21sthsrefseqGO2ALLPROBES Maps between manufacturer IDs and Gene Ontology (GO) IDs
hugene21sthsrefseqGO2PROBE Maps between manufacturer IDs and Gene Ontology (GO) IDs
hugene21sthsrefseqLOCUSID Map between Manufacturer Identifiers and Entrez Gene
hugene21sthsrefseqMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
hugene21sthsrefseqMAPCOUNTS Number of mapped keys for the maps in package hugene21sthsrefseq.db
hugene21sthsrefseqOMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
hugene21sthsrefseqORGANISM The Organism information for hugene21sthsrefseq
hugene21sthsrefseqORGPKG The Organism information for hugene21sthsrefseq
hugene21sthsrefseqPATH Mappings between probe identifiers and KEGG pathway identifiers
hugene21sthsrefseqPATH2PROBE Mappings between probe identifiers and KEGG pathway identifiers
hugene21sthsrefseqPFAM Maps between Manufacturer Identifiers and PFAM Identifiers
hugene21sthsrefseqPMID Maps between Manufacturer Identifiers and PubMed Identifiers
hugene21sthsrefseqPMID2PROBE Maps between Manufacturer Identifiers and PubMed Identifiers
hugene21sthsrefseqPROSITE Maps between Manufacturer Identifiers and PROSITE Identifiers
hugene21sthsrefseqREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
hugene21sthsrefseqSYMBOL Map between Manufacturer Identifiers and Gene Symbols
hugene21sthsrefseqUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
hugene21sthsrefseqUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
hugene21sthsrefseqUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
hugene21sthsrefseq_dbconn Collect information about the package annotation DB
hugene21sthsrefseq_dbfile Collect information about the package annotation DB
hugene21sthsrefseq_dbInfo Collect information about the package annotation DB
hugene21sthsrefseq_dbschema Collect information about the package annotation DB